Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gm24791-201ENSMUST00000104284 131 ntBASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 Gm13263-201ENSMUST00000121271 838 ntBASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 Gm43186-201ENSMUST00000198130 824 ntBASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 Gm18059-201ENSMUST00000208073 580 ntBASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 Gm45594-201ENSMUST00000211717 241 ntBASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 Gm5805-201ENSMUST00000072779 456 ntBASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 Gm6170-201ENSMUST00000187672 1388 ntBASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf38bQ80SY5 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.17□□□□□ -0.46
Prpf38bQ80SY5 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf38bQ80SY5 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf38bQ80SY5 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf38bQ80SY5 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Prpf38bQ80SY5 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf38bQ80SY5 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf38bQ80SY5 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf38bQ80SY5 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf38bQ80SY5 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf38bQ80SY5 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf38bQ80SY5 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf38bQ80SY5 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf38bQ80SY5 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf38bQ80SY5 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf38bQ80SY5 Mir181d-201ENSMUST00000102383 72 ntBASIC12.17□□□□□ -0.46
Prpf38bQ80SY5 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC12.17□□□□□ -0.46
Prpf38bQ80SY5 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf38bQ80SY5 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC12.17□□□□□ -0.46
Prpf38bQ80SY5 Gm3551-201ENSMUST00000190750 664 ntBASIC12.17□□□□□ -0.46
Prpf38bQ80SY5 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.17□□□□□ -0.46
Prpf38bQ80SY5 Gm43377-201ENSMUST00000201640 455 ntBASIC12.17□□□□□ -0.46
Prpf38bQ80SY5 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf38bQ80SY5 Gm14005-208ENSMUST00000223654 681 ntBASIC12.17□□□□□ -0.46
Prpf38bQ80SY5 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC12.17□□□□□ -0.46
Prpf38bQ80SY5 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf38bQ80SY5 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Prpf38bQ80SY5 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Prpf38bQ80SY5 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf38bQ80SY5 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf38bQ80SY5 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Prpf38bQ80SY5 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf38bQ80SY5 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Prpf38bQ80SY5 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf38bQ80SY5 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf38bQ80SY5 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf38bQ80SY5 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.17□□□□□ -0.46
Prpf38bQ80SY5 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf38bQ80SY5 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf38bQ80SY5 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf38bQ80SY5 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf38bQ80SY5 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf38bQ80SY5 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Prpf38bQ80SY5 Rad51c-202ENSMUST00000067692 3944 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf38bQ80SY5 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf38bQ80SY5 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 Gm18829-201ENSMUST00000188150 1622 ntBASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 Gm15595-201ENSMUST00000120840 961 ntBASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Prpf38bQ80SY5 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms