Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Scaf4Q6PFF0 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Scaf4Q6PFF0 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.33□□□□□ -0.6
Scaf4Q6PFF0 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Scaf4Q6PFF0 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC11.33□□□□□ -0.6
Scaf4Q6PFF0 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Scaf4Q6PFF0 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Scaf4Q6PFF0 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 Gm5745-201ENSMUST00000183748 313 ntBASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 Gm29396-201ENSMUST00000185659 716 ntBASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 Gm38117-201ENSMUST00000194653 939 ntBASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 Rps4l-202ENSMUST00000204242 789 ntBASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 Gm45880-201ENSMUST00000213041 853 ntBASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 AC140375.2-201ENSMUST00000225283 584 ntBASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scaf4Q6PFF0 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 AC154171.2-201ENSMUST00000225219 2652 ntBASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Gm6754-201ENSMUST00000117124 913 ntBASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Mir1982-201ENSMUST00000157368 74 ntBASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Gm4310-201ENSMUST00000177847 889 ntBASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Gm28196-201ENSMUST00000187719 640 ntBASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Olfr284-202ENSMUST00000206647 966 ntBASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Scaf4Q6PFF0 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms