Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smchd1Q6P5D8 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC12.55□□□□□ -0.4
Smchd1Q6P5D8 Gm16030-201ENSMUST00000159098 603 ntBASIC12.55□□□□□ -0.4
Smchd1Q6P5D8 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.55□□□□□ -0.4
Smchd1Q6P5D8 Gm28324-201ENSMUST00000187913 264 ntBASIC12.55□□□□□ -0.4
Smchd1Q6P5D8 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC12.55□□□□□ -0.4
Smchd1Q6P5D8 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC12.55□□□□□ -0.4
Smchd1Q6P5D8 Mt1-202ENSMUST00000211807 1085 ntBASIC12.55□□□□□ -0.4
Smchd1Q6P5D8 Gm9102-201ENSMUST00000219250 465 ntBASIC12.55□□□□□ -0.4
Smchd1Q6P5D8 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smchd1Q6P5D8 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smchd1Q6P5D8 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smchd1Q6P5D8 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Smchd1Q6P5D8 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC12.55□□□□□ -0.4
Smchd1Q6P5D8 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smchd1Q6P5D8 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smchd1Q6P5D8 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smchd1Q6P5D8 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smchd1Q6P5D8 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smchd1Q6P5D8 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC12.55□□□□□ -0.4
Smchd1Q6P5D8 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smchd1Q6P5D8 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smchd1Q6P5D8 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smchd1Q6P5D8 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smchd1Q6P5D8 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Smchd1Q6P5D8 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smchd1Q6P5D8 Gm44106-201ENSMUST00000203153 1599 ntBASIC12.54□□□□□ -0.4
Smchd1Q6P5D8 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Smchd1Q6P5D8 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smchd1Q6P5D8 Gm25562-201ENSMUST00000104608 133 ntBASIC12.54□□□□□ -0.4
Smchd1Q6P5D8 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smchd1Q6P5D8 Gm6322-201ENSMUST00000118789 1004 ntBASIC12.54□□□□□ -0.4
Smchd1Q6P5D8 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Smchd1Q6P5D8 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC12.54□□□□□ -0.4
Smchd1Q6P5D8 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smchd1Q6P5D8 Gm17889-201ENSMUST00000198410 598 ntBASIC12.54□□□□□ -0.4
Smchd1Q6P5D8 CT009536.2-201ENSMUST00000225370 665 ntBASIC12.54□□□□□ -0.4
Smchd1Q6P5D8 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smchd1Q6P5D8 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Smchd1Q6P5D8 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Smchd1Q6P5D8 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smchd1Q6P5D8 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smchd1Q6P5D8 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smchd1Q6P5D8 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smchd1Q6P5D8 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smchd1Q6P5D8 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smchd1Q6P5D8 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Smchd1Q6P5D8 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smchd1Q6P5D8 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smchd1Q6P5D8 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smchd1Q6P5D8 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smchd1Q6P5D8 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smchd1Q6P5D8 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smchd1Q6P5D8 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smchd1Q6P5D8 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smchd1Q6P5D8 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smchd1Q6P5D8 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smchd1Q6P5D8 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smchd1Q6P5D8 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smchd1Q6P5D8 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smchd1Q6P5D8 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smchd1Q6P5D8 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smchd1Q6P5D8 AC155245.1-201ENSMUST00000222266 1804 ntBASIC12.53□□□□□ -0.4
Smchd1Q6P5D8 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.53□□□□□ -0.4
Smchd1Q6P5D8 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smchd1Q6P5D8 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smchd1Q6P5D8 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Smchd1Q6P5D8 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC12.53□□□□□ -0.4
Smchd1Q6P5D8 Gm13600-201ENSMUST00000117949 744 ntBASIC12.53□□□□□ -0.4
Smchd1Q6P5D8 Gm20392-201ENSMUST00000173047 701 ntBASIC12.53□□□□□ -0.4
Smchd1Q6P5D8 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smchd1Q6P5D8 AC122035.1-201ENSMUST00000227576 1016 ntBASIC12.53□□□□□ -0.4
Smchd1Q6P5D8 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smchd1Q6P5D8 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smchd1Q6P5D8 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smchd1Q6P5D8 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smchd1Q6P5D8 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smchd1Q6P5D8 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Smchd1Q6P5D8 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smchd1Q6P5D8 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smchd1Q6P5D8 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.53□□□□□ -0.4
Smchd1Q6P5D8 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smchd1Q6P5D8 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smchd1Q6P5D8 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC12.53□□□□□ -0.4
Smchd1Q6P5D8 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smchd1Q6P5D8 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Smchd1Q6P5D8 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.53□□□□□ -0.4
Smchd1Q6P5D8 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Smchd1Q6P5D8 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smchd1Q6P5D8 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Smchd1Q6P5D8 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smchd1Q6P5D8 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Smchd1Q6P5D8 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smchd1Q6P5D8 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Smchd1Q6P5D8 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
Smchd1Q6P5D8 Gm12389-201ENSMUST00000117696 418 ntBASIC12.52□□□□□ -0.4
Smchd1Q6P5D8 Gm9673-201ENSMUST00000119287 781 ntBASIC12.52□□□□□ -0.4
Smchd1Q6P5D8 Gm16219-201ENSMUST00000120096 274 ntBASIC12.52□□□□□ -0.4
Smchd1Q6P5D8 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smchd1Q6P5D8 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms