Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ParpbpQ6IRT3 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
ParpbpQ6IRT3 Gm21811-201ENSMUST00000096485 930 ntBASIC10.84□□□□□ -0.67
ParpbpQ6IRT3 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
ParpbpQ6IRT3 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
ParpbpQ6IRT3 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
ParpbpQ6IRT3 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
ParpbpQ6IRT3 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ParpbpQ6IRT3 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
ParpbpQ6IRT3 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ParpbpQ6IRT3 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ParpbpQ6IRT3 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
ParpbpQ6IRT3 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
ParpbpQ6IRT3 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
ParpbpQ6IRT3 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
ParpbpQ6IRT3 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
ParpbpQ6IRT3 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC10.83□□□□□ -0.67
ParpbpQ6IRT3 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
ParpbpQ6IRT3 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 Cd63-ps-202ENSMUST00000154992 717 ntBASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 Gm6450-201ENSMUST00000200896 574 ntBASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 Gm45199-201ENSMUST00000207640 1507 ntBASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
ParpbpQ6IRT3 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 Gm43760-201ENSMUST00000202120 3015 ntBASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 Gm14058-201ENSMUST00000116082 735 ntBASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 Mir5132-201ENSMUST00000175166 71 ntBASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 Gm5732-201ENSMUST00000182596 1007 ntBASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 Gm8100-201ENSMUST00000182906 988 ntBASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 Mir7070-201ENSMUST00000183657 86 ntBASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 Gm18827-201ENSMUST00000188341 790 ntBASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 Gm18753-201ENSMUST00000201000 566 ntBASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 Gm44136-201ENSMUST00000203819 1106 ntBASIC10.82□□□□□ -0.68
ParpbpQ6IRT3 AC155637.1-201ENSMUST00000218560 636 ntBASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms