Protein–RNA interactions for Protein: Q6DIC0

Smarca2, Probable global transcription activator SNF2L2, mousemouse

Predictions only

Length 1,577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2Q6DIC0 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarca2Q6DIC0 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarca2Q6DIC0 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smarca2Q6DIC0 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smarca2Q6DIC0 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarca2Q6DIC0 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarca2Q6DIC0 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smarca2Q6DIC0 AC151836.1-201ENSMUST00000228730 1637 ntBASIC19.69■□□□□ 0.74
Smarca2Q6DIC0 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarca2Q6DIC0 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarca2Q6DIC0 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarca2Q6DIC0 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smarca2Q6DIC0 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarca2Q6DIC0 Gm16080-201ENSMUST00000152128 692 ntTSL 3 BASIC19.69■□□□□ 0.74
Smarca2Q6DIC0 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smarca2Q6DIC0 Gm24346-201ENSMUST00000158712 194 ntBASIC19.69■□□□□ 0.74
Smarca2Q6DIC0 Rps14-201ENSMUST00000025511 683 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarca2Q6DIC0 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarca2Q6DIC0 Gm9701-201ENSMUST00000077976 427 ntBASIC19.69■□□□□ 0.74
Smarca2Q6DIC0 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC19.69■□□□□ 0.74
Smarca2Q6DIC0 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Smarca2Q6DIC0 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarca2Q6DIC0 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarca2Q6DIC0 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smarca2Q6DIC0 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Smarca2Q6DIC0 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC19.68■□□□□ 0.74
Smarca2Q6DIC0 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarca2Q6DIC0 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarca2Q6DIC0 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarca2Q6DIC0 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Smarca2Q6DIC0 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarca2Q6DIC0 Gm5766-201ENSMUST00000160520 1977 ntBASIC19.68■□□□□ 0.74
Smarca2Q6DIC0 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarca2Q6DIC0 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarca2Q6DIC0 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarca2Q6DIC0 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Smarca2Q6DIC0 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Smarca2Q6DIC0 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC19.68■□□□□ 0.74
Smarca2Q6DIC0 Gm12946-201ENSMUST00000122969 519 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smarca2Q6DIC0 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC19.68■□□□□ 0.74
Smarca2Q6DIC0 Glrx2-206ENSMUST00000145969 924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarca2Q6DIC0 Gm44420-201ENSMUST00000203669 490 ntBASIC19.68■□□□□ 0.74
Smarca2Q6DIC0 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarca2Q6DIC0 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC19.68■□□□□ 0.74
Smarca2Q6DIC0 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarca2Q6DIC0 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Smarca2Q6DIC0 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smarca2Q6DIC0 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarca2Q6DIC0 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smarca2Q6DIC0 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarca2Q6DIC0 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smarca2Q6DIC0 Gm7405-201ENSMUST00000121476 1337 ntBASIC19.68■□□□□ 0.74
Smarca2Q6DIC0 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarca2Q6DIC0 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarca2Q6DIC0 AC122273.1-201ENSMUST00000213634 2327 ntBASIC19.68■□□□□ 0.74
Smarca2Q6DIC0 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Smarca2Q6DIC0 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarca2Q6DIC0 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Smarca2Q6DIC0 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC19.67■□□□□ 0.74
Smarca2Q6DIC0 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarca2Q6DIC0 Ccna1-204ENSMUST00000198320 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarca2Q6DIC0 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC19.67■□□□□ 0.74
Smarca2Q6DIC0 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarca2Q6DIC0 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Smarca2Q6DIC0 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarca2Q6DIC0 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Smarca2Q6DIC0 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Smarca2Q6DIC0 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
Smarca2Q6DIC0 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC19.67■□□□□ 0.74
Smarca2Q6DIC0 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC19.67■□□□□ 0.74
Smarca2Q6DIC0 AC133517.1-201ENSMUST00000225825 594 ntBASIC19.67■□□□□ 0.74
Smarca2Q6DIC0 CT025679.1-201ENSMUST00000227106 449 ntBASIC19.67■□□□□ 0.74
Smarca2Q6DIC0 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarca2Q6DIC0 Gm37058-201ENSMUST00000193393 1644 ntBASIC19.67■□□□□ 0.74
Smarca2Q6DIC0 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarca2Q6DIC0 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarca2Q6DIC0 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC19.67■□□□□ 0.74
Smarca2Q6DIC0 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarca2Q6DIC0 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarca2Q6DIC0 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarca2Q6DIC0 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarca2Q6DIC0 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Smarca2Q6DIC0 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarca2Q6DIC0 Gm16288-201ENSMUST00000137940 367 ntBASIC19.66■□□□□ 0.74
Smarca2Q6DIC0 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smarca2Q6DIC0 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Smarca2Q6DIC0 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarca2Q6DIC0 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smarca2Q6DIC0 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarca2Q6DIC0 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarca2Q6DIC0 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smarca2Q6DIC0 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Smarca2Q6DIC0 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarca2Q6DIC0 AC153524.2-202ENSMUST00000220401 1794 ntBASIC19.66■□□□□ 0.74
Smarca2Q6DIC0 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Smarca2Q6DIC0 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarca2Q6DIC0 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarca2Q6DIC0 Gm42971-201ENSMUST00000199228 2079 ntBASIC19.66■□□□□ 0.74
Smarca2Q6DIC0 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smarca2Q6DIC0 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms