Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Scube3Q66PY1 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.34□□□□□ -0.43
Scube3Q66PY1 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scube3Q66PY1 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Scube3Q66PY1 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scube3Q66PY1 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scube3Q66PY1 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scube3Q66PY1 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.34□□□□□ -0.43
Scube3Q66PY1 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.34□□□□□ -0.43
Scube3Q66PY1 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.34□□□□□ -0.43
Scube3Q66PY1 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Scube3Q66PY1 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.34□□□□□ -0.43
Scube3Q66PY1 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Scube3Q66PY1 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scube3Q66PY1 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scube3Q66PY1 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Scube3Q66PY1 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Scube3Q66PY1 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Scube3Q66PY1 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scube3Q66PY1 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scube3Q66PY1 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Scube3Q66PY1 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scube3Q66PY1 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Scube3Q66PY1 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Scube3Q66PY1 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scube3Q66PY1 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scube3Q66PY1 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.33□□□□□ -0.44
Scube3Q66PY1 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scube3Q66PY1 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scube3Q66PY1 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.33□□□□□ -0.44
Scube3Q66PY1 Ifna13-201ENSMUST00000105149 819 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Scube3Q66PY1 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Scube3Q66PY1 Gm12579-201ENSMUST00000118040 783 ntBASIC12.33□□□□□ -0.44
Scube3Q66PY1 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.33□□□□□ -0.44
Scube3Q66PY1 Gm11783-201ENSMUST00000119549 885 ntBASIC12.33□□□□□ -0.44
Scube3Q66PY1 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.33□□□□□ -0.44
Scube3Q66PY1 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.33□□□□□ -0.44
Scube3Q66PY1 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.33□□□□□ -0.44
Scube3Q66PY1 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scube3Q66PY1 Gm11588-201ENSMUST00000141758 658 ntTSL 5 BASIC12.33□□□□□ -0.44
Scube3Q66PY1 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC12.33□□□□□ -0.44
Scube3Q66PY1 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Scube3Q66PY1 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Scube3Q66PY1 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.33□□□□□ -0.44
Scube3Q66PY1 Gm29664-201ENSMUST00000191125 463 ntBASIC12.33□□□□□ -0.44
Scube3Q66PY1 Gm18348-201ENSMUST00000191227 820 ntBASIC12.33□□□□□ -0.44
Scube3Q66PY1 Gm38314-201ENSMUST00000195709 625 ntBASIC12.33□□□□□ -0.44
Scube3Q66PY1 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.33□□□□□ -0.44
Scube3Q66PY1 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scube3Q66PY1 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.33□□□□□ -0.44
Scube3Q66PY1 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scube3Q66PY1 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.33□□□□□ -0.44
Scube3Q66PY1 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scube3Q66PY1 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.33□□□□□ -0.44
Scube3Q66PY1 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scube3Q66PY1 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scube3Q66PY1 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scube3Q66PY1 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scube3Q66PY1 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Scube3Q66PY1 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.33□□□□□ -0.44
Scube3Q66PY1 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scube3Q66PY1 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scube3Q66PY1 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scube3Q66PY1 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Scube3Q66PY1 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scube3Q66PY1 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scube3Q66PY1 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scube3Q66PY1 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.33□□□□□ -0.44
Scube3Q66PY1 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scube3Q66PY1 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scube3Q66PY1 AC160863.4-201ENSMUST00000218099 1334 ntTSL 5 BASIC12.33□□□□□ -0.44
Scube3Q66PY1 Ctsll3-201ENSMUST00000043754 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scube3Q66PY1 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scube3Q66PY1 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scube3Q66PY1 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scube3Q66PY1 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scube3Q66PY1 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scube3Q66PY1 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scube3Q66PY1 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scube3Q66PY1 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Scube3Q66PY1 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scube3Q66PY1 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scube3Q66PY1 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.32□□□□□ -0.44
Scube3Q66PY1 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scube3Q66PY1 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.32□□□□□ -0.44
Scube3Q66PY1 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Scube3Q66PY1 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Scube3Q66PY1 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Scube3Q66PY1 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.32□□□□□ -0.44
Scube3Q66PY1 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.32□□□□□ -0.44
Scube3Q66PY1 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.32□□□□□ -0.44
Scube3Q66PY1 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Scube3Q66PY1 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scube3Q66PY1 Gm13045-201ENSMUST00000119019 712 ntBASIC12.32□□□□□ -0.44
Scube3Q66PY1 Gm11700-201ENSMUST00000119409 403 ntBASIC12.32□□□□□ -0.44
Scube3Q66PY1 Gm11331-201ENSMUST00000119764 288 ntBASIC12.32□□□□□ -0.44
Scube3Q66PY1 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scube3Q66PY1 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.32□□□□□ -0.44
Scube3Q66PY1 Gm8546-201ENSMUST00000178288 1264 ntBASIC12.32□□□□□ -0.44
Scube3Q66PY1 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms