Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
AtmQ62388 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
AtmQ62388 AC151836.1-201ENSMUST00000228730 1637 ntBASIC10.58□□□□□ -0.72
AtmQ62388 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
AtmQ62388 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
AtmQ62388 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.58□□□□□ -0.72
AtmQ62388 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
AtmQ62388 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
AtmQ62388 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
AtmQ62388 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
AtmQ62388 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
AtmQ62388 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC10.58□□□□□ -0.72
AtmQ62388 Naa38-204ENSMUST00000144531 671 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
AtmQ62388 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
AtmQ62388 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC10.58□□□□□ -0.72
AtmQ62388 Gm44173-201ENSMUST00000204316 132 ntBASIC10.58□□□□□ -0.72
AtmQ62388 AC163646.3-201ENSMUST00000228879 772 ntBASIC10.58□□□□□ -0.72
AtmQ62388 1700069L16Rik-201ENSMUST00000047891 537 ntAPPRIS P5 TSL 2 BASIC10.58□□□□□ -0.72
AtmQ62388 Fam186a-201ENSMUST00000062631 759 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
AtmQ62388 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
AtmQ62388 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
AtmQ62388 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
AtmQ62388 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
AtmQ62388 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
AtmQ62388 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
AtmQ62388 3110001I22Rik-201ENSMUST00000035426 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
AtmQ62388 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
AtmQ62388 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
AtmQ62388 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
AtmQ62388 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
AtmQ62388 AC148324.1-201ENSMUST00000219034 4240 ntBASIC10.58□□□□□ -0.72
AtmQ62388 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
AtmQ62388 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC10.57□□□□□ -0.72
AtmQ62388 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
AtmQ62388 Gm13580-201ENSMUST00000131457 566 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
AtmQ62388 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
AtmQ62388 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
AtmQ62388 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
AtmQ62388 Lims1-201ENSMUST00000020077 1565 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
AtmQ62388 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC10.57□□□□□ -0.72
AtmQ62388 Gm30504-201ENSMUST00000209316 1688 ntTSL 5 BASIC10.57□□□□□ -0.72
AtmQ62388 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.57□□□□□ -0.72
AtmQ62388 Gm8725-201ENSMUST00000221829 1333 ntBASIC10.57□□□□□ -0.72
AtmQ62388 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
AtmQ62388 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
AtmQ62388 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
AtmQ62388 Gm10134-201ENSMUST00000074761 381 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
AtmQ62388 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
AtmQ62388 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
AtmQ62388 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
AtmQ62388 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
AtmQ62388 AC154639.1-201ENSMUST00000224393 2849 ntBASIC10.57□□□□□ -0.72
AtmQ62388 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.57□□□□□ -0.72
AtmQ62388 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
AtmQ62388 Ighv13-1-201ENSMUST00000103480 294 ntBASIC10.57□□□□□ -0.72
AtmQ62388 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
AtmQ62388 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC10.57□□□□□ -0.72
AtmQ62388 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC10.57□□□□□ -0.72
AtmQ62388 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
AtmQ62388 Gm24466-201ENSMUST00000179978 109 ntBASIC10.57□□□□□ -0.72
AtmQ62388 Gm44908-201ENSMUST00000208610 266 ntBASIC10.57□□□□□ -0.72
AtmQ62388 Gm45584-201ENSMUST00000211586 1143 ntTSL 5 BASIC10.57□□□□□ -0.72
AtmQ62388 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
AtmQ62388 Fdps-201ENSMUST00000081848 1237 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
AtmQ62388 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
AtmQ62388 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
AtmQ62388 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC10.57□□□□□ -0.72
AtmQ62388 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
AtmQ62388 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
AtmQ62388 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
AtmQ62388 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
AtmQ62388 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
AtmQ62388 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
AtmQ62388 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
AtmQ62388 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
AtmQ62388 Shf-205ENSMUST00000121237 882 ntTSL 3 BASIC10.56□□□□□ -0.72
AtmQ62388 Cyp2j15-ps-201ENSMUST00000122267 686 ntBASIC10.56□□□□□ -0.72
AtmQ62388 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
AtmQ62388 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
AtmQ62388 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
AtmQ62388 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
AtmQ62388 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
AtmQ62388 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC10.56□□□□□ -0.72
AtmQ62388 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
AtmQ62388 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
AtmQ62388 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
AtmQ62388 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
AtmQ62388 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
AtmQ62388 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
AtmQ62388 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
AtmQ62388 Gm45643-201ENSMUST00000211364 1484 ntBASIC10.56□□□□□ -0.72
AtmQ62388 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
AtmQ62388 Gm38192-201ENSMUST00000194364 1847 ntBASIC10.56□□□□□ -0.72
AtmQ62388 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
AtmQ62388 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
AtmQ62388 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
AtmQ62388 Gm15636-201ENSMUST00000119205 668 ntBASIC10.56□□□□□ -0.72
AtmQ62388 Gm12961-201ENSMUST00000120507 1050 ntBASIC10.56□□□□□ -0.72
AtmQ62388 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
AtmQ62388 Gm13377-201ENSMUST00000137984 683 ntBASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms