Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gm15746-201ENSMUST00000120684 1027 ntBASIC13.32□□□□□ -0.28
Scn9aQ62205 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scn9aQ62205 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC13.32□□□□□ -0.28
Scn9aQ62205 Gm4868-201ENSMUST00000164138 789 ntBASIC13.32□□□□□ -0.28
Scn9aQ62205 Gm7928-201ENSMUST00000181249 701 ntBASIC13.32□□□□□ -0.28
Scn9aQ62205 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC13.32□□□□□ -0.28
Scn9aQ62205 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC13.32□□□□□ -0.28
Scn9aQ62205 Gm19918-201ENSMUST00000194858 400 ntBASIC13.32□□□□□ -0.28
Scn9aQ62205 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC13.32□□□□□ -0.28
Scn9aQ62205 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC13.32□□□□□ -0.28
Scn9aQ62205 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn9aQ62205 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scn9aQ62205 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Scn9aQ62205 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn9aQ62205 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn9aQ62205 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.32□□□□□ -0.28
Scn9aQ62205 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn9aQ62205 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn9aQ62205 Gm43152-201ENSMUST00000202495 1638 ntBASIC13.32□□□□□ -0.28
Scn9aQ62205 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC13.32□□□□□ -0.28
Scn9aQ62205 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn9aQ62205 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scn9aQ62205 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn9aQ62205 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn9aQ62205 Adgrv1-214ENSMUST00000224088 1492 ntBASIC13.32□□□□□ -0.28
Scn9aQ62205 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC13.32□□□□□ -0.28
Scn9aQ62205 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scn9aQ62205 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC13.32□□□□□ -0.28
Scn9aQ62205 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Scn9aQ62205 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC13.32□□□□□ -0.28
Scn9aQ62205 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn9aQ62205 AC154639.1-201ENSMUST00000224393 2849 ntBASIC13.32□□□□□ -0.28
Scn9aQ62205 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn9aQ62205 Snord17-201ENSMUST00000104526 238 ntBASIC13.32□□□□□ -0.28
Scn9aQ62205 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Scn9aQ62205 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scn9aQ62205 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scn9aQ62205 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC13.32□□□□□ -0.28
Scn9aQ62205 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scn9aQ62205 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC13.32□□□□□ -0.28
Scn9aQ62205 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scn9aQ62205 Gm30055-201ENSMUST00000203175 803 ntBASIC13.32□□□□□ -0.28
Scn9aQ62205 Gm7880-201ENSMUST00000203748 871 ntBASIC13.32□□□□□ -0.28
Scn9aQ62205 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn9aQ62205 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Scn9aQ62205 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC13.32□□□□□ -0.28
Scn9aQ62205 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scn9aQ62205 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn9aQ62205 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Scn9aQ62205 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scn9aQ62205 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn9aQ62205 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scn9aQ62205 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Scn9aQ62205 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn9aQ62205 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Scn9aQ62205 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.32□□□□□ -0.28
Scn9aQ62205 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Scn9aQ62205 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Scn9aQ62205 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scn9aQ62205 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn9aQ62205 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC13.31□□□□□ -0.28
Scn9aQ62205 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Scn9aQ62205 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn9aQ62205 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn9aQ62205 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn9aQ62205 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn9aQ62205 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn9aQ62205 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Scn9aQ62205 Gm13281-201ENSMUST00000120871 567 ntBASIC13.31□□□□□ -0.28
Scn9aQ62205 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scn9aQ62205 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scn9aQ62205 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC13.31□□□□□ -0.28
Scn9aQ62205 n-R5s130-201ENSMUST00000178128 119 ntBASIC13.31□□□□□ -0.28
Scn9aQ62205 Gm24312-201ENSMUST00000178677 119 ntBASIC13.31□□□□□ -0.28
Scn9aQ62205 n-R5s106-201ENSMUST00000179060 119 ntBASIC13.31□□□□□ -0.28
Scn9aQ62205 n-R5s118-201ENSMUST00000179887 119 ntBASIC13.31□□□□□ -0.28
Scn9aQ62205 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC13.31□□□□□ -0.28
Scn9aQ62205 Gm17936-201ENSMUST00000199413 988 ntBASIC13.31□□□□□ -0.28
Scn9aQ62205 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC13.31□□□□□ -0.28
Scn9aQ62205 CT030195.2-201ENSMUST00000226074 1286 ntBASIC13.31□□□□□ -0.28
Scn9aQ62205 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC13.31□□□□□ -0.28
Scn9aQ62205 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Scn9aQ62205 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn9aQ62205 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Scn9aQ62205 AC124397.2-201ENSMUST00000225575 2215 ntBASIC13.31□□□□□ -0.28
Scn9aQ62205 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Scn9aQ62205 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn9aQ62205 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn9aQ62205 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scn9aQ62205 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn9aQ62205 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Scn9aQ62205 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn9aQ62205 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn9aQ62205 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn9aQ62205 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scn9aQ62205 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC13.31□□□□□ -0.28
Scn9aQ62205 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn9aQ62205 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scn9aQ62205 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scn9aQ62205 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms