Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vps54Q5SPW0 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps54Q5SPW0 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps54Q5SPW0 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC13.78□□□□□ -0.2
Vps54Q5SPW0 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps54Q5SPW0 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps54Q5SPW0 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Vps54Q5SPW0 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC13.78□□□□□ -0.2
Vps54Q5SPW0 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vps54Q5SPW0 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC13.78□□□□□ -0.2
Vps54Q5SPW0 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC13.78□□□□□ -0.2
Vps54Q5SPW0 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC13.78□□□□□ -0.2
Vps54Q5SPW0 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vps54Q5SPW0 Mir3547-201ENSMUST00000175461 88 ntBASIC13.78□□□□□ -0.2
Vps54Q5SPW0 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC13.78□□□□□ -0.2
Vps54Q5SPW0 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps54Q5SPW0 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Vps54Q5SPW0 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps54Q5SPW0 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vps54Q5SPW0 Gm28424-201ENSMUST00000187393 1319 ntBASIC13.78□□□□□ -0.2
Vps54Q5SPW0 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps54Q5SPW0 Gm45776-201ENSMUST00000212366 1522 ntBASIC13.78□□□□□ -0.2
Vps54Q5SPW0 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps54Q5SPW0 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.78□□□□□ -0.2
Vps54Q5SPW0 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps54Q5SPW0 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC13.78□□□□□ -0.2
Vps54Q5SPW0 Gm18806-201ENSMUST00000207607 1775 ntBASIC13.78□□□□□ -0.2
Vps54Q5SPW0 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vps54Q5SPW0 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps54Q5SPW0 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vps54Q5SPW0 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vps54Q5SPW0 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps54Q5SPW0 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.78□□□□□ -0.2
Vps54Q5SPW0 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps54Q5SPW0 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Vps54Q5SPW0 Gm43127-201ENSMUST00000195890 2789 ntBASIC13.77□□□□□ -0.2
Vps54Q5SPW0 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Vps54Q5SPW0 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Vps54Q5SPW0 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Vps54Q5SPW0 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC13.77□□□□□ -0.21
Vps54Q5SPW0 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Vps54Q5SPW0 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Vps54Q5SPW0 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC13.77□□□□□ -0.21
Vps54Q5SPW0 Gm13888-201ENSMUST00000119148 422 ntBASIC13.77□□□□□ -0.21
Vps54Q5SPW0 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Vps54Q5SPW0 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps54Q5SPW0 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC13.77□□□□□ -0.21
Vps54Q5SPW0 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps54Q5SPW0 Gm23694-201ENSMUST00000179335 110 ntBASIC13.77□□□□□ -0.21
Vps54Q5SPW0 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC13.77□□□□□ -0.21
Vps54Q5SPW0 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC13.77□□□□□ -0.21
Vps54Q5SPW0 AC122891.1-201ENSMUST00000218671 268 ntBASIC13.77□□□□□ -0.21
Vps54Q5SPW0 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC13.77□□□□□ -0.21
Vps54Q5SPW0 Gm9661-201ENSMUST00000221611 1122 ntBASIC13.77□□□□□ -0.21
Vps54Q5SPW0 AC122811.1-201ENSMUST00000222257 2921 ntBASIC13.77□□□□□ -0.21
Vps54Q5SPW0 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC13.77□□□□□ -0.21
Vps54Q5SPW0 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps54Q5SPW0 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps54Q5SPW0 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Vps54Q5SPW0 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC13.77□□□□□ -0.21
Vps54Q5SPW0 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps54Q5SPW0 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps54Q5SPW0 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC13.77□□□□□ -0.21
Vps54Q5SPW0 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps54Q5SPW0 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC13.77□□□□□ -0.21
Vps54Q5SPW0 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Vps54Q5SPW0 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps54Q5SPW0 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps54Q5SPW0 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps54Q5SPW0 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.76□□□□□ -0.21
Vps54Q5SPW0 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps54Q5SPW0 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps54Q5SPW0 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps54Q5SPW0 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps54Q5SPW0 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps54Q5SPW0 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps54Q5SPW0 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps54Q5SPW0 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps54Q5SPW0 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps54Q5SPW0 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps54Q5SPW0 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps54Q5SPW0 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps54Q5SPW0 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps54Q5SPW0 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC13.76□□□□□ -0.21
Vps54Q5SPW0 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
Vps54Q5SPW0 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps54Q5SPW0 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vps54Q5SPW0 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vps54Q5SPW0 Gm14395-201ENSMUST00000120494 563 ntBASIC13.76□□□□□ -0.21
Vps54Q5SPW0 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC13.76□□□□□ -0.21
Vps54Q5SPW0 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vps54Q5SPW0 Olfml3-204ENSMUST00000169286 874 ntBASIC13.76□□□□□ -0.21
Vps54Q5SPW0 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC13.76□□□□□ -0.21
Vps54Q5SPW0 Gm21778-201ENSMUST00000178779 471 ntBASIC13.76□□□□□ -0.21
Vps54Q5SPW0 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC13.76□□□□□ -0.21
Vps54Q5SPW0 Gm44551-201ENSMUST00000208804 171 ntBASIC13.76□□□□□ -0.21
Vps54Q5SPW0 Gm45550-201ENSMUST00000209380 946 ntBASIC13.76□□□□□ -0.21
Vps54Q5SPW0 Gm45856-201ENSMUST00000212752 416 ntBASIC13.76□□□□□ -0.21
Vps54Q5SPW0 AC141438.2-201ENSMUST00000215068 271 ntBASIC13.76□□□□□ -0.21
Vps54Q5SPW0 AC165260.2-203ENSMUST00000224237 336 ntBASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms