Protein–RNA interactions for Protein: Q52KF3

Spire1, Protein spire homolog 1, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spire1Q52KF3 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Spire1Q52KF3 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Spire1Q52KF3 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Spire1Q52KF3 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC11.75□□□□□ -0.53
Spire1Q52KF3 Gm11560-201ENSMUST00000117567 948 ntBASIC11.75□□□□□ -0.53
Spire1Q52KF3 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Spire1Q52KF3 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC11.75□□□□□ -0.53
Spire1Q52KF3 Gm24992-201ENSMUST00000157412 130 ntBASIC11.75□□□□□ -0.53
Spire1Q52KF3 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC11.75□□□□□ -0.53
Spire1Q52KF3 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC11.75□□□□□ -0.53
Spire1Q52KF3 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Spire1Q52KF3 Gm9081-201ENSMUST00000182346 991 ntBASIC11.75□□□□□ -0.53
Spire1Q52KF3 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC11.75□□□□□ -0.53
Spire1Q52KF3 Gm43692-201ENSMUST00000198236 1062 ntBASIC11.75□□□□□ -0.53
Spire1Q52KF3 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.75□□□□□ -0.53
Spire1Q52KF3 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC11.75□□□□□ -0.53
Spire1Q52KF3 AC168279.1-201ENSMUST00000214611 382 ntBASIC11.75□□□□□ -0.53
Spire1Q52KF3 Gm9111-201ENSMUST00000219394 709 ntBASIC11.75□□□□□ -0.53
Spire1Q52KF3 Gm18968-201ENSMUST00000221319 862 ntBASIC11.75□□□□□ -0.53
Spire1Q52KF3 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Spire1Q52KF3 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC11.75□□□□□ -0.53
Spire1Q52KF3 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Spire1Q52KF3 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.75□□□□□ -0.53
Spire1Q52KF3 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Spire1Q52KF3 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Spire1Q52KF3 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Spire1Q52KF3 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Spire1Q52KF3 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Spire1Q52KF3 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Spire1Q52KF3 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.75□□□□□ -0.53
Spire1Q52KF3 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
Spire1Q52KF3 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Spire1Q52KF3 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.75□□□□□ -0.53
Spire1Q52KF3 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Spire1Q52KF3 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Spire1Q52KF3 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Spire1Q52KF3 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Spire1Q52KF3 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.75□□□□□ -0.53
Spire1Q52KF3 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.75□□□□□ -0.53
Spire1Q52KF3 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Spire1Q52KF3 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Spire1Q52KF3 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Spire1Q52KF3 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Spire1Q52KF3 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Spire1Q52KF3 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Spire1Q52KF3 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Spire1Q52KF3 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Spire1Q52KF3 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Spire1Q52KF3 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Spire1Q52KF3 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Spire1Q52KF3 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Spire1Q52KF3 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Spire1Q52KF3 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Spire1Q52KF3 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Spire1Q52KF3 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Spire1Q52KF3 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Spire1Q52KF3 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Spire1Q52KF3 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Spire1Q52KF3 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Spire1Q52KF3 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.74□□□□□ -0.53
Spire1Q52KF3 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Spire1Q52KF3 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.74□□□□□ -0.53
Spire1Q52KF3 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Spire1Q52KF3 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Spire1Q52KF3 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Spire1Q52KF3 Mir453-201ENSMUST00000104732 82 ntBASIC11.74□□□□□ -0.53
Spire1Q52KF3 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Spire1Q52KF3 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC11.74□□□□□ -0.53
Spire1Q52KF3 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Spire1Q52KF3 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC11.74□□□□□ -0.53
Spire1Q52KF3 Gm13351-201ENSMUST00000118087 414 ntBASIC11.74□□□□□ -0.53
Spire1Q52KF3 Gm6322-201ENSMUST00000118789 1004 ntBASIC11.74□□□□□ -0.53
Spire1Q52KF3 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Spire1Q52KF3 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Spire1Q52KF3 Gm22146-201ENSMUST00000157397 288 ntBASIC11.74□□□□□ -0.53
Spire1Q52KF3 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Spire1Q52KF3 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.74□□□□□ -0.53
Spire1Q52KF3 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Spire1Q52KF3 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC11.74□□□□□ -0.53
Spire1Q52KF3 Gm19587-201ENSMUST00000191395 545 ntBASIC11.74□□□□□ -0.53
Spire1Q52KF3 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Spire1Q52KF3 Gm6423-201ENSMUST00000204315 934 ntBASIC11.74□□□□□ -0.53
Spire1Q52KF3 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Spire1Q52KF3 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC11.74□□□□□ -0.53
Spire1Q52KF3 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC11.74□□□□□ -0.53
Spire1Q52KF3 Gm7959-201ENSMUST00000221823 1078 ntBASIC11.74□□□□□ -0.53
Spire1Q52KF3 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.74□□□□□ -0.53
Spire1Q52KF3 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC11.74□□□□□ -0.53
Spire1Q52KF3 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Spire1Q52KF3 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC11.74□□□□□ -0.53
Spire1Q52KF3 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Spire1Q52KF3 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Spire1Q52KF3 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Spire1Q52KF3 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Spire1Q52KF3 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Spire1Q52KF3 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Spire1Q52KF3 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Spire1Q52KF3 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Spire1Q52KF3 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Spire1Q52KF3 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms