Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Col8a1Q00780 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Col8a1Q00780 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Col8a1Q00780 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Col8a1Q00780 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a1Q00780 Gm18294-201ENSMUST00000176980 1748 ntBASIC9.87□□□□□ -0.83
Col8a1Q00780 Gm29100-201ENSMUST00000187564 4410 ntBASIC9.87□□□□□ -0.83
Col8a1Q00780 AC129931.1-201ENSMUST00000228865 1861 ntBASIC9.87□□□□□ -0.83
Col8a1Q00780 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a1Q00780 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC9.87□□□□□ -0.83
Col8a1Q00780 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a1Q00780 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a1Q00780 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a1Q00780 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a1Q00780 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a1Q00780 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a1Q00780 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a1Q00780 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a1Q00780 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a1Q00780 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Col8a1Q00780 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a1Q00780 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC9.87□□□□□ -0.83
Col8a1Q00780 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Col8a1Q00780 Gm12663-201ENSMUST00000118481 958 ntBASIC9.87□□□□□ -0.83
Col8a1Q00780 Gm11783-201ENSMUST00000119549 885 ntBASIC9.87□□□□□ -0.83
Col8a1Q00780 Gm11502-201ENSMUST00000120917 1211 ntBASIC9.87□□□□□ -0.83
Col8a1Q00780 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC9.87□□□□□ -0.83
Col8a1Q00780 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC9.87□□□□□ -0.83
Col8a1Q00780 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Col8a1Q00780 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a1Q00780 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a1Q00780 Gm23400-201ENSMUST00000174994 102 ntBASIC9.87□□□□□ -0.83
Col8a1Q00780 Gm26463-201ENSMUST00000175065 101 ntBASIC9.87□□□□□ -0.83
Col8a1Q00780 Gm24332-201ENSMUST00000175102 102 ntBASIC9.87□□□□□ -0.83
Col8a1Q00780 Gm25959-201ENSMUST00000175112 102 ntBASIC9.87□□□□□ -0.83
Col8a1Q00780 Gm22475-201ENSMUST00000175169 102 ntBASIC9.87□□□□□ -0.83
Col8a1Q00780 Gm22903-201ENSMUST00000175193 102 ntBASIC9.87□□□□□ -0.83
Col8a1Q00780 Gm25070-201ENSMUST00000175237 102 ntBASIC9.87□□□□□ -0.83
Col8a1Q00780 Gm24159-201ENSMUST00000175264 102 ntBASIC9.87□□□□□ -0.83
Col8a1Q00780 Gm25299-201ENSMUST00000175283 102 ntBASIC9.87□□□□□ -0.83
Col8a1Q00780 Gm23798-201ENSMUST00000175560 102 ntBASIC9.87□□□□□ -0.83
Col8a1Q00780 Gm23802-201ENSMUST00000175565 102 ntBASIC9.87□□□□□ -0.83
Col8a1Q00780 Gm25708-201ENSMUST00000177687 102 ntBASIC9.87□□□□□ -0.83
Col8a1Q00780 Gm24370-201ENSMUST00000178007 102 ntBASIC9.87□□□□□ -0.83
Col8a1Q00780 Gm23049-201ENSMUST00000178068 102 ntBASIC9.87□□□□□ -0.83
Col8a1Q00780 Gm28019-201ENSMUST00000178138 101 ntBASIC9.87□□□□□ -0.83
Col8a1Q00780 Gm25571-201ENSMUST00000178322 102 ntBASIC9.87□□□□□ -0.83
Col8a1Q00780 Gm25355-201ENSMUST00000178456 101 ntBASIC9.87□□□□□ -0.83
Col8a1Q00780 Gm24975-201ENSMUST00000178492 101 ntBASIC9.87□□□□□ -0.83
Col8a1Q00780 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a1Q00780 Gm23189-201ENSMUST00000178954 102 ntBASIC9.87□□□□□ -0.83
Col8a1Q00780 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Col8a1Q00780 Gm25100-201ENSMUST00000179750 101 ntBASIC9.87□□□□□ -0.83
Col8a1Q00780 Gm23064-201ENSMUST00000179866 101 ntBASIC9.87□□□□□ -0.83
Col8a1Q00780 Gm26982-201ENSMUST00000182250 1151 ntBASIC9.87□□□□□ -0.83
Col8a1Q00780 Gm9081-201ENSMUST00000182346 991 ntBASIC9.87□□□□□ -0.83
Col8a1Q00780 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a1Q00780 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a1Q00780 Gm43671-201ENSMUST00000200422 433 ntBASIC9.87□□□□□ -0.83
Col8a1Q00780 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC9.87□□□□□ -0.83
Col8a1Q00780 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC9.87□□□□□ -0.83
Col8a1Q00780 Gm39288-201ENSMUST00000210554 446 ntBASIC9.87□□□□□ -0.83
Col8a1Q00780 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC9.87□□□□□ -0.83
Col8a1Q00780 Gm2553-201ENSMUST00000215986 605 ntBASIC9.87□□□□□ -0.83
Col8a1Q00780 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC9.87□□□□□ -0.83
Col8a1Q00780 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC9.87□□□□□ -0.83
Col8a1Q00780 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC9.87□□□□□ -0.83
Col8a1Q00780 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Col8a1Q00780 Gm19046-201ENSMUST00000221263 1298 ntBASIC9.87□□□□□ -0.83
Col8a1Q00780 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a1Q00780 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a1Q00780 Gm9791-201ENSMUST00000060997 447 ntBASIC9.87□□□□□ -0.83
Col8a1Q00780 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a1Q00780 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a1Q00780 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a1Q00780 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a1Q00780 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a1Q00780 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Col8a1Q00780 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a1Q00780 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a1Q00780 AC159195.1-201ENSMUST00000225867 2086 ntBASIC9.87□□□□□ -0.83
Col8a1Q00780 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a1Q00780 Gm37744-201ENSMUST00000194616 1590 ntBASIC9.87□□□□□ -0.83
Col8a1Q00780 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a1Q00780 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a1Q00780 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a1Q00780 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a1Q00780 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC9.87□□□□□ -0.83
Col8a1Q00780 Rab3c-202ENSMUST00000223922 2398 ntBASIC9.87□□□□□ -0.83
Col8a1Q00780 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a1Q00780 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a1Q00780 AC127597.1-201ENSMUST00000225697 5711 ntBASIC9.87□□□□□ -0.83
Col8a1Q00780 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a1Q00780 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a1Q00780 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a1Q00780 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a1Q00780 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a1Q00780 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a1Q00780 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a1Q00780 Gm8899-201ENSMUST00000214635 1332 ntBASIC9.86□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms