Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GabpaQ00422 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GabpaQ00422 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GabpaQ00422 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GabpaQ00422 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
GabpaQ00422 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GabpaQ00422 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GabpaQ00422 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GabpaQ00422 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
GabpaQ00422 AC127597.1-201ENSMUST00000225697 5711 ntBASIC13.03□□□□□ -0.32
GabpaQ00422 CT010447.1-201ENSMUST00000225657 1608 ntBASIC13.03□□□□□ -0.32
GabpaQ00422 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
GabpaQ00422 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
GabpaQ00422 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC13.03□□□□□ -0.32
GabpaQ00422 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GabpaQ00422 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GabpaQ00422 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
GabpaQ00422 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
GabpaQ00422 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
GabpaQ00422 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC13.03□□□□□ -0.32
GabpaQ00422 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC13.03□□□□□ -0.32
GabpaQ00422 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
GabpaQ00422 Gm4895-201ENSMUST00000181646 1137 ntBASIC13.03□□□□□ -0.32
GabpaQ00422 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC13.03□□□□□ -0.32
GabpaQ00422 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC13.03□□□□□ -0.32
GabpaQ00422 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC13.03□□□□□ -0.32
GabpaQ00422 Gm5298-201ENSMUST00000201122 892 ntBASIC13.03□□□□□ -0.32
GabpaQ00422 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC13.03□□□□□ -0.32
GabpaQ00422 AC134248.1-201ENSMUST00000216113 1176 ntBASIC13.03□□□□□ -0.32
GabpaQ00422 Gm18514-201ENSMUST00000218980 436 ntBASIC13.03□□□□□ -0.32
GabpaQ00422 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GabpaQ00422 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
GabpaQ00422 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GabpaQ00422 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GabpaQ00422 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
GabpaQ00422 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
GabpaQ00422 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.03□□□□□ -0.32
GabpaQ00422 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
GabpaQ00422 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC13.03□□□□□ -0.32
GabpaQ00422 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
GabpaQ00422 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GabpaQ00422 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GabpaQ00422 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
GabpaQ00422 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
GabpaQ00422 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
GabpaQ00422 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
GabpaQ00422 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
GabpaQ00422 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
GabpaQ00422 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
GabpaQ00422 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.02□□□□□ -0.32
GabpaQ00422 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
GabpaQ00422 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
GabpaQ00422 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
GabpaQ00422 Gm25880-201ENSMUST00000104331 132 ntBASIC13.02□□□□□ -0.33
GabpaQ00422 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC13.02□□□□□ -0.33
GabpaQ00422 Gm14270-201ENSMUST00000118388 846 ntBASIC13.02□□□□□ -0.33
GabpaQ00422 Gm8302-201ENSMUST00000119217 852 ntBASIC13.02□□□□□ -0.33
GabpaQ00422 Gm9673-201ENSMUST00000119287 781 ntBASIC13.02□□□□□ -0.33
GabpaQ00422 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC13.02□□□□□ -0.33
GabpaQ00422 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC13.02□□□□□ -0.33
GabpaQ00422 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
GabpaQ00422 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
GabpaQ00422 Gm9135-201ENSMUST00000182963 990 ntBASIC13.02□□□□□ -0.33
GabpaQ00422 Gm29164-201ENSMUST00000185454 1024 ntBASIC13.02□□□□□ -0.33
GabpaQ00422 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
GabpaQ00422 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC13.02□□□□□ -0.33
GabpaQ00422 Gm5599-201ENSMUST00000209602 788 ntBASIC13.02□□□□□ -0.33
GabpaQ00422 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
GabpaQ00422 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
GabpaQ00422 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
GabpaQ00422 Gm28424-201ENSMUST00000187393 1319 ntBASIC13.02□□□□□ -0.33
GabpaQ00422 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
GabpaQ00422 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
GabpaQ00422 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
GabpaQ00422 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
GabpaQ00422 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
GabpaQ00422 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
GabpaQ00422 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.02□□□□□ -0.33
GabpaQ00422 Nudt13-207ENSMUST00000224311 1574 ntBASIC13.02□□□□□ -0.33
GabpaQ00422 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
GabpaQ00422 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
GabpaQ00422 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.02□□□□□ -0.33
GabpaQ00422 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
GabpaQ00422 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
GabpaQ00422 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GabpaQ00422 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
GabpaQ00422 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
GabpaQ00422 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
GabpaQ00422 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
GabpaQ00422 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.01□□□□□ -0.33
GabpaQ00422 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GabpaQ00422 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GabpaQ00422 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.01□□□□□ -0.33
GabpaQ00422 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
GabpaQ00422 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GabpaQ00422 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC13.01□□□□□ -0.33
GabpaQ00422 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
GabpaQ00422 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
GabpaQ00422 Gm14807-201ENSMUST00000116640 983 ntBASIC13.01□□□□□ -0.33
GabpaQ00422 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms