Protein–RNA interactions for Protein: P85442

Vgll3, Transcription cofactor vestigial-like protein 3, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vgll3P85442 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.76□□□□□ -0.53
Vgll3P85442 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC11.76□□□□□ -0.53
Vgll3P85442 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Vgll3P85442 Gm9229-201ENSMUST00000222777 126 ntBASIC11.76□□□□□ -0.53
Vgll3P85442 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Vgll3P85442 Mir125a-201ENSMUST00000083545 68 ntBASIC11.76□□□□□ -0.53
Vgll3P85442 Top1-201ENSMUST00000109468 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vgll3P85442 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Vgll3P85442 Rab3il1-203ENSMUST00000121418 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vgll3P85442 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vgll3P85442 Polr2a-201ENSMUST00000058470 6740 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vgll3P85442 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vgll3P85442 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vgll3P85442 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Vgll3P85442 Irx6-202ENSMUST00000167261 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vgll3P85442 Klrc1-201ENSMUST00000032270 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vgll3P85442 Gm12436-201ENSMUST00000131099 2959 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Vgll3P85442 Prkar1a-203ENSMUST00000106677 3513 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Vgll3P85442 Flad1-201ENSMUST00000050398 3007 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Vgll3P85442 Slc22a13-201ENSMUST00000084797 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vgll3P85442 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vgll3P85442 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Vgll3P85442 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vgll3P85442 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vgll3P85442 4732487G21Rik-201ENSMUST00000181495 2664 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vgll3P85442 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vgll3P85442 Gm7932-202ENSMUST00000205047 2194 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vgll3P85442 Nedd4l-201ENSMUST00000080418 3326 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vgll3P85442 Ppargc1a-205ENSMUST00000196968 2754 ntTSL 5 BASIC11.75□□□□□ -0.53
Vgll3P85442 AC123619.1-203ENSMUST00000225276 2757 ntBASIC11.75□□□□□ -0.53
Vgll3P85442 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vgll3P85442 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vgll3P85442 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vgll3P85442 Usp45-201ENSMUST00000040429 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vgll3P85442 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vgll3P85442 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vgll3P85442 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vgll3P85442 Olfr1219-203ENSMUST00000214442 3694 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Vgll3P85442 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vgll3P85442 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC11.75□□□□□ -0.53
Vgll3P85442 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vgll3P85442 Gm7820-201ENSMUST00000121012 1052 ntBASIC11.75□□□□□ -0.53
Vgll3P85442 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC11.75□□□□□ -0.53
Vgll3P85442 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vgll3P85442 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Vgll3P85442 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Vgll3P85442 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.75□□□□□ -0.53
Vgll3P85442 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.75□□□□□ -0.53
Vgll3P85442 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vgll3P85442 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vgll3P85442 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vgll3P85442 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Vgll3P85442 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vgll3P85442 Cnksr3-202ENSMUST00000150282 2554 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vgll3P85442 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vgll3P85442 Nudcd3-201ENSMUST00000066496 3927 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vgll3P85442 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vgll3P85442 Itgam-201ENSMUST00000064821 4682 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Vgll3P85442 Fam221b-201ENSMUST00000056474 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vgll3P85442 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vgll3P85442 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vgll3P85442 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vgll3P85442 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Vgll3P85442 Npy4r-201ENSMUST00000052164 3627 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vgll3P85442 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vgll3P85442 Mthfd1-201ENSMUST00000021443 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vgll3P85442 Pakap-203ENSMUST00000150412 5163 ntAPPRIS P5 TSL 5 BASIC11.74□□□□□ -0.53
Vgll3P85442 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vgll3P85442 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vgll3P85442 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vgll3P85442 Mfn2-204ENSMUST00000105716 4241 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vgll3P85442 Amph-204ENSMUST00000200466 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vgll3P85442 Rab36-207ENSMUST00000147802 3291 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Vgll3P85442 Il9r-205ENSMUST00000145401 4482 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vgll3P85442 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vgll3P85442 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vgll3P85442 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vgll3P85442 Vps11-201ENSMUST00000034644 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vgll3P85442 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vgll3P85442 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC11.74□□□□□ -0.53
Vgll3P85442 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Vgll3P85442 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vgll3P85442 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vgll3P85442 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Vgll3P85442 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Vgll3P85442 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Vgll3P85442 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC11.74□□□□□ -0.53
Vgll3P85442 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.74□□□□□ -0.53
Vgll3P85442 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Vgll3P85442 Gm29667-201ENSMUST00000190817 490 ntBASIC11.74□□□□□ -0.53
Vgll3P85442 Gm44855-201ENSMUST00000205725 362 ntBASIC11.74□□□□□ -0.53
Vgll3P85442 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vgll3P85442 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC11.74□□□□□ -0.53
Vgll3P85442 Asic2-202ENSMUST00000066197 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vgll3P85442 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vgll3P85442 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vgll3P85442 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Vgll3P85442 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Vgll3P85442 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vgll3P85442 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms