Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.32□□□□□ -0.6
Shox2P70390 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.32□□□□□ -0.6
Shox2P70390 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shox2P70390 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Shox2P70390 Gm27682-201ENSMUST00000183930 110 ntBASIC11.32□□□□□ -0.6
Shox2P70390 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.32□□□□□ -0.6
Shox2P70390 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.32□□□□□ -0.6
Shox2P70390 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.32□□□□□ -0.6
Shox2P70390 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shox2P70390 AC154461.3-201ENSMUST00000224831 573 ntBASIC11.32□□□□□ -0.6
Shox2P70390 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Shox2P70390 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shox2P70390 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shox2P70390 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Shox2P70390 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Shox2P70390 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Shox2P70390 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Shox2P70390 Anapc15-213ENSMUST00000178851 2797 ntTSL 2 BASIC11.32□□□□□ -0.6
Shox2P70390 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shox2P70390 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shox2P70390 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Shox2P70390 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shox2P70390 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shox2P70390 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shox2P70390 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Shox2P70390 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC11.31□□□□□ -0.6
Shox2P70390 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Shox2P70390 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Shox2P70390 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Shox2P70390 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shox2P70390 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shox2P70390 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Shox2P70390 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC11.31□□□□□ -0.6
Shox2P70390 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Shox2P70390 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shox2P70390 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC11.31□□□□□ -0.6
Shox2P70390 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shox2P70390 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.31□□□□□ -0.6
Shox2P70390 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Shox2P70390 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Shox2P70390 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC11.31□□□□□ -0.6
Shox2P70390 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.31□□□□□ -0.6
Shox2P70390 Gm15004-201ENSMUST00000119192 630 ntBASIC11.31□□□□□ -0.6
Shox2P70390 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC11.31□□□□□ -0.6
Shox2P70390 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC11.31□□□□□ -0.6
Shox2P70390 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.31□□□□□ -0.6
Shox2P70390 Gm6473-201ENSMUST00000188572 1210 ntBASIC11.31□□□□□ -0.6
Shox2P70390 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Shox2P70390 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.31□□□□□ -0.6
Shox2P70390 Gm5982-201ENSMUST00000196234 512 ntBASIC11.31□□□□□ -0.6
Shox2P70390 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.31□□□□□ -0.6
Shox2P70390 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.31□□□□□ -0.6
Shox2P70390 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.31□□□□□ -0.6
Shox2P70390 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shox2P70390 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shox2P70390 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shox2P70390 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Shox2P70390 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shox2P70390 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Shox2P70390 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Shox2P70390 Snd1-201ENSMUST00000001460 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shox2P70390 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Shox2P70390 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC11.31□□□□□ -0.6
Shox2P70390 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Shox2P70390 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Shox2P70390 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shox2P70390 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.31□□□□□ -0.6
Shox2P70390 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shox2P70390 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shox2P70390 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shox2P70390 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Shox2P70390 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shox2P70390 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shox2P70390 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Shox2P70390 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.3□□□□□ -0.6
Shox2P70390 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.3□□□□□ -0.6
Shox2P70390 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Shox2P70390 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC11.3□□□□□ -0.6
Shox2P70390 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shox2P70390 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shox2P70390 N4bp2l1-205ENSMUST00000202031 1864 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Shox2P70390 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11.3□□□□□ -0.6
Shox2P70390 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Shox2P70390 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shox2P70390 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Shox2P70390 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shox2P70390 Gm6222-202ENSMUST00000182143 629 ntBASIC11.3□□□□□ -0.6
Shox2P70390 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.3□□□□□ -0.6
Shox2P70390 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shox2P70390 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shox2P70390 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Shox2P70390 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Shox2P70390 AC124732.3-201ENSMUST00000221835 1765 ntBASIC11.3□□□□□ -0.6
Shox2P70390 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shox2P70390 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shox2P70390 Zfp873-203ENSMUST00000209622 2284 ntTSL 2 BASIC11.3□□□□□ -0.6
Shox2P70390 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Shox2P70390 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Shox2P70390 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Shox2P70390 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms