Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.79□□□□□ -0.52
Ybx1P62960 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ybx1P62960 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ybx1P62960 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ybx1P62960 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ybx1P62960 Gm12179-201ENSMUST00000118344 1272 ntBASIC11.79□□□□□ -0.52
Ybx1P62960 Gm12791-201ENSMUST00000120788 655 ntBASIC11.79□□□□□ -0.52
Ybx1P62960 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC11.79□□□□□ -0.52
Ybx1P62960 Gm22379-201ENSMUST00000157480 131 ntBASIC11.79□□□□□ -0.52
Ybx1P62960 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.79□□□□□ -0.52
Ybx1P62960 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Ybx1P62960 Gm8197-202ENSMUST00000193422 934 ntBASIC11.79□□□□□ -0.52
Ybx1P62960 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.79□□□□□ -0.52
Ybx1P62960 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ybx1P62960 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC11.79□□□□□ -0.52
Ybx1P62960 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Ybx1P62960 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ybx1P62960 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Ybx1P62960 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ybx1P62960 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ybx1P62960 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ybx1P62960 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ybx1P62960 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ybx1P62960 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Ybx1P62960 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ybx1P62960 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ybx1P62960 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.78□□□□□ -0.52
Ybx1P62960 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ybx1P62960 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ybx1P62960 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ybx1P62960 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ybx1P62960 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ybx1P62960 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Ybx1P62960 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ybx1P62960 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ybx1P62960 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ybx1P62960 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ybx1P62960 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ybx1P62960 Gm4294-201ENSMUST00000105169 614 ntBASIC11.78□□□□□ -0.52
Ybx1P62960 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC11.78□□□□□ -0.52
Ybx1P62960 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ybx1P62960 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ybx1P62960 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.78□□□□□ -0.52
Ybx1P62960 Gm15374-201ENSMUST00000119313 844 ntBASIC11.78□□□□□ -0.52
Ybx1P62960 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ybx1P62960 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ybx1P62960 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ybx1P62960 Gm24248-201ENSMUST00000157321 322 ntBASIC11.78□□□□□ -0.52
Ybx1P62960 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC11.78□□□□□ -0.52
Ybx1P62960 Gm20392-201ENSMUST00000173047 701 ntBASIC11.78□□□□□ -0.52
Ybx1P62960 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ybx1P62960 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC11.78□□□□□ -0.52
Ybx1P62960 Gm5700-201ENSMUST00000191483 989 ntBASIC11.78□□□□□ -0.52
Ybx1P62960 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ybx1P62960 Gm35960-201ENSMUST00000202712 767 ntBASIC11.78□□□□□ -0.52
Ybx1P62960 Gm43912-201ENSMUST00000204352 538 ntBASIC11.78□□□□□ -0.52
Ybx1P62960 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC11.78□□□□□ -0.52
Ybx1P62960 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Ybx1P62960 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ybx1P62960 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Ybx1P62960 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ybx1P62960 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ybx1P62960 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ybx1P62960 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.78□□□□□ -0.52
Ybx1P62960 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Ybx1P62960 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ybx1P62960 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ybx1P62960 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ybx1P62960 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ybx1P62960 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ybx1P62960 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ybx1P62960 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ybx1P62960 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ybx1P62960 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ybx1P62960 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ybx1P62960 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ybx1P62960 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.77□□□□□ -0.52
Ybx1P62960 Gm44056-201ENSMUST00000204623 1427 ntBASIC11.77□□□□□ -0.52
Ybx1P62960 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.77□□□□□ -0.52
Ybx1P62960 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
Ybx1P62960 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ybx1P62960 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.77□□□□□ -0.52
Ybx1P62960 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ybx1P62960 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.77□□□□□ -0.52
Ybx1P62960 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ybx1P62960 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ybx1P62960 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ybx1P62960 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ybx1P62960 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ybx1P62960 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ybx1P62960 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ybx1P62960 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Ybx1P62960 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ybx1P62960 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ybx1P62960 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ybx1P62960 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ybx1P62960 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Ybx1P62960 Gm13351-201ENSMUST00000118087 414 ntBASIC11.77□□□□□ -0.53
Ybx1P62960 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ybx1P62960 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms