Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl39P62892 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Rpl39P62892 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC8.16□□□□□ -1.1
Rpl39P62892 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC8.16□□□□□ -1.1
Rpl39P62892 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl39P62892 Gm19287-201ENSMUST00000203190 358 ntBASIC8.16□□□□□ -1.1
Rpl39P62892 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC8.16□□□□□ -1.1
Rpl39P62892 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Rpl39P62892 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl39P62892 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl39P62892 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl39P62892 Gm4864-201ENSMUST00000219894 1461 ntBASIC8.16□□□□□ -1.1
Rpl39P62892 AC126444.1-201ENSMUST00000225938 1768 ntBASIC8.16□□□□□ -1.1
Rpl39P62892 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC8.16□□□□□ -1.1
Rpl39P62892 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl39P62892 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl39P62892 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl39P62892 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Rpl39P62892 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl39P62892 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Rpl39P62892 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Rpl39P62892 Snora73a-201ENSMUST00000082453 205 ntBASIC8.16□□□□□ -1.1
Rpl39P62892 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl39P62892 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC8.16□□□□□ -1.1
Rpl39P62892 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl39P62892 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl39P62892 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Rpl39P62892 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC8.16□□□□□ -1.1
Rpl39P62892 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl39P62892 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl39P62892 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl39P62892 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl39P62892 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Rpl39P62892 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl39P62892 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl39P62892 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Rpl39P62892 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC8.15□□□□□ -1.1
Rpl39P62892 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl39P62892 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl39P62892 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl39P62892 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl39P62892 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl39P62892 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl39P62892 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Rpl39P62892 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC8.15□□□□□ -1.1
Rpl39P62892 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl39P62892 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl39P62892 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl39P62892 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl39P62892 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl39P62892 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Rpl39P62892 Gm44663-201ENSMUST00000206898 3150 ntBASIC8.15□□□□□ -1.1
Rpl39P62892 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl39P62892 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl39P62892 Gm10829-201ENSMUST00000202084 2988 ntBASIC8.15□□□□□ -1.1
Rpl39P62892 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl39P62892 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC8.15□□□□□ -1.1
Rpl39P62892 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Rpl39P62892 Gm12846-201ENSMUST00000120431 1373 ntBASIC8.15□□□□□ -1.1
Rpl39P62892 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC8.15□□□□□ -1.1
Rpl39P62892 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl39P62892 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl39P62892 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Rpl39P62892 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC8.15□□□□□ -1.1
Rpl39P62892 Gm11989-201ENSMUST00000117240 672 ntBASIC8.15□□□□□ -1.1
Rpl39P62892 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl39P62892 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl39P62892 Gm11362-201ENSMUST00000118838 850 ntBASIC8.15□□□□□ -1.1
Rpl39P62892 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl39P62892 Auts2-212ENSMUST00000178555 309 ntBASIC8.15□□□□□ -1.1
Rpl39P62892 Gm9034-201ENSMUST00000182071 1005 ntBASIC8.15□□□□□ -1.1
Rpl39P62892 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC8.15□□□□□ -1.1
Rpl39P62892 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC8.15□□□□□ -1.1
Rpl39P62892 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC8.15□□□□□ -1.1
Rpl39P62892 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl39P62892 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl39P62892 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl39P62892 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl39P62892 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Rpl39P62892 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl39P62892 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl39P62892 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl39P62892 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl39P62892 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl39P62892 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC8.15□□□□□ -1.1
Rpl39P62892 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl39P62892 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl39P62892 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl39P62892 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl39P62892 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rpl39P62892 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC8.15□□□□□ -1.11
Rpl39P62892 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.11
Rpl39P62892 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
Rpl39P62892 AC169511.2-201ENSMUST00000226674 2063 ntBASIC8.15□□□□□ -1.11
Rpl39P62892 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
Rpl39P62892 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC8.15□□□□□ -1.11
Rpl39P62892 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Rpl39P62892 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
Rpl39P62892 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
Rpl39P62892 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms