Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Gm6180-201ENSMUST00000065243 498 ntBASIC9.66□□□□□ -0.86
Gabra1P62812 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gabra1P62812 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gabra1P62812 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gabra1P62812 Lmo3-207ENSMUST00000163065 2425 ntTSL 3 BASIC9.66□□□□□ -0.86
Gabra1P62812 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gabra1P62812 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gabra1P62812 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Gabra1P62812 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gabra1P62812 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC9.66□□□□□ -0.86
Gabra1P62812 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gabra1P62812 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Gabra1P62812 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Gabra1P62812 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gabra1P62812 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Gabra1P62812 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gabra1P62812 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gabra1P62812 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gabra1P62812 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gabra1P62812 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gabra1P62812 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gabra1P62812 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gabra1P62812 Gm7553-201ENSMUST00000185805 1426 ntBASIC9.65□□□□□ -0.86
Gabra1P62812 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC9.65□□□□□ -0.86
Gabra1P62812 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Gabra1P62812 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC9.65□□□□□ -0.86
Gabra1P62812 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gabra1P62812 Gm21039-201ENSMUST00000223359 2012 ntBASIC9.65□□□□□ -0.86
Gabra1P62812 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Gabra1P62812 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC9.65□□□□□ -0.86
Gabra1P62812 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Gabra1P62812 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC9.65□□□□□ -0.86
Gabra1P62812 AC122273.1-201ENSMUST00000213634 2327 ntBASIC9.65□□□□□ -0.86
Gabra1P62812 Gm43579-201ENSMUST00000202387 1307 ntBASIC9.65□□□□□ -0.86
Gabra1P62812 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gabra1P62812 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gabra1P62812 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Gabra1P62812 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Gabra1P62812 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gabra1P62812 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC9.65□□□□□ -0.86
Gabra1P62812 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Gabra1P62812 Gm11591-201ENSMUST00000120063 702 ntBASIC9.65□□□□□ -0.86
Gabra1P62812 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC9.65□□□□□ -0.86
Gabra1P62812 Gm23984-201ENSMUST00000157139 203 ntBASIC9.65□□□□□ -0.86
Gabra1P62812 Gm27682-201ENSMUST00000183930 110 ntBASIC9.65□□□□□ -0.86
Gabra1P62812 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC9.65□□□□□ -0.86
Gabra1P62812 Gm29649-201ENSMUST00000185649 419 ntBASIC9.65□□□□□ -0.86
Gabra1P62812 Gm37597-201ENSMUST00000191853 382 ntBASIC9.65□□□□□ -0.86
Gabra1P62812 Gm9908-201ENSMUST00000211534 448 ntBASIC9.65□□□□□ -0.86
Gabra1P62812 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gabra1P62812 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gabra1P62812 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gabra1P62812 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gabra1P62812 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Gabra1P62812 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Gabra1P62812 AC123857.2-201ENSMUST00000225756 1582 ntBASIC9.65□□□□□ -0.86
Gabra1P62812 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gabra1P62812 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Gabra1P62812 AC126257.1-201ENSMUST00000213195 1536 ntBASIC9.65□□□□□ -0.86
Gabra1P62812 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Gabra1P62812 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC9.65□□□□□ -0.86
Gabra1P62812 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Gabra1P62812 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gabra1P62812 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Gabra1P62812 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Gabra1P62812 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Gabra1P62812 Gm37348-201ENSMUST00000193104 1789 ntBASIC9.65□□□□□ -0.87
Gabra1P62812 Gm8706-201ENSMUST00000197372 1491 ntBASIC9.65□□□□□ -0.87
Gabra1P62812 Adgrv1-214ENSMUST00000224088 1492 ntBASIC9.65□□□□□ -0.87
Gabra1P62812 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Gabra1P62812 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Gabra1P62812 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
Gabra1P62812 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Gabra1P62812 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Gabra1P62812 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Gabra1P62812 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC9.65□□□□□ -0.87
Gabra1P62812 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Gabra1P62812 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Gabra1P62812 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Gabra1P62812 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC9.64□□□□□ -0.87
Gabra1P62812 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Gabra1P62812 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC9.64□□□□□ -0.87
Gabra1P62812 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Gabra1P62812 Gm2673-201ENSMUST00000120958 1608 ntBASIC9.64□□□□□ -0.87
Gabra1P62812 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Gabra1P62812 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Gabra1P62812 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Gabra1P62812 Gm5620-201ENSMUST00000077991 1348 ntBASIC9.64□□□□□ -0.87
Gabra1P62812 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC9.64□□□□□ -0.87
Gabra1P62812 Gm45041-201ENSMUST00000207366 3108 ntBASIC9.64□□□□□ -0.87
Gabra1P62812 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Gabra1P62812 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC9.64□□□□□ -0.87
Gabra1P62812 Gm12960-201ENSMUST00000120017 1066 ntBASIC9.64□□□□□ -0.87
Gabra1P62812 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC9.64□□□□□ -0.87
Gabra1P62812 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Gabra1P62812 Gm9002-201ENSMUST00000178437 499 ntBASIC9.64□□□□□ -0.87
Gabra1P62812 H2-Pa-201ENSMUST00000182803 626 ntBASIC9.64□□□□□ -0.87
Gabra1P62812 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC9.64□□□□□ -0.87
Gabra1P62812 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC9.64□□□□□ -0.87
Gabra1P62812 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms