Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Sssca1P56873 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC9.27□□□□□ -0.93
Sssca1P56873 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sssca1P56873 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sssca1P56873 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC9.27□□□□□ -0.93
Sssca1P56873 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sssca1P56873 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sssca1P56873 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC9.27□□□□□ -0.93
Sssca1P56873 Gm15370-201ENSMUST00000117158 253 ntBASIC9.27□□□□□ -0.93
Sssca1P56873 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC9.27□□□□□ -0.93
Sssca1P56873 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Sssca1P56873 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sssca1P56873 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC9.27□□□□□ -0.93
Sssca1P56873 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Sssca1P56873 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sssca1P56873 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC9.27□□□□□ -0.93
Sssca1P56873 Gm19309-201ENSMUST00000218295 205 ntBASIC9.27□□□□□ -0.93
Sssca1P56873 AC140375.2-201ENSMUST00000225283 584 ntBASIC9.27□□□□□ -0.93
Sssca1P56873 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sssca1P56873 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sssca1P56873 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sssca1P56873 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sssca1P56873 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Sssca1P56873 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sssca1P56873 Gm45206-201ENSMUST00000206885 2285 ntBASIC9.27□□□□□ -0.93
Sssca1P56873 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sssca1P56873 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sssca1P56873 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sssca1P56873 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sssca1P56873 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Sssca1P56873 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sssca1P56873 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Sssca1P56873 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sssca1P56873 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sssca1P56873 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Sssca1P56873 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sssca1P56873 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sssca1P56873 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sssca1P56873 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sssca1P56873 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC9.26□□□□□ -0.93
Sssca1P56873 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Sssca1P56873 Gm35850-202ENSMUST00000211705 2120 ntBASIC9.26□□□□□ -0.93
Sssca1P56873 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sssca1P56873 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Sssca1P56873 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Sssca1P56873 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sssca1P56873 Gm43127-201ENSMUST00000195890 2789 ntBASIC9.26□□□□□ -0.93
Sssca1P56873 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sssca1P56873 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sssca1P56873 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sssca1P56873 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sssca1P56873 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sssca1P56873 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sssca1P56873 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Sssca1P56873 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Sssca1P56873 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Sssca1P56873 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sssca1P56873 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC9.26□□□□□ -0.93
Sssca1P56873 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC9.26□□□□□ -0.93
Sssca1P56873 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sssca1P56873 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sssca1P56873 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Sssca1P56873 Gm11500-201ENSMUST00000118237 601 ntBASIC9.26□□□□□ -0.93
Sssca1P56873 Gm13829-201ENSMUST00000119600 138 ntBASIC9.26□□□□□ -0.93
Sssca1P56873 Gm6963-201ENSMUST00000147879 379 ntBASIC9.26□□□□□ -0.93
Sssca1P56873 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC9.26□□□□□ -0.93
Sssca1P56873 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Sssca1P56873 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC9.26□□□□□ -0.93
Sssca1P56873 Gm18187-201ENSMUST00000196476 984 ntBASIC9.26□□□□□ -0.93
Sssca1P56873 Gm6439-201ENSMUST00000199849 862 ntBASIC9.26□□□□□ -0.93
Sssca1P56873 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
Sssca1P56873 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC9.26□□□□□ -0.93
Sssca1P56873 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC9.26□□□□□ -0.93
Sssca1P56873 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC9.26□□□□□ -0.93
Sssca1P56873 AC132384.14-201ENSMUST00000219346 1147 ntBASIC9.26□□□□□ -0.93
Sssca1P56873 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sssca1P56873 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sssca1P56873 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Sssca1P56873 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC9.26□□□□□ -0.93
Sssca1P56873 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sssca1P56873 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sssca1P56873 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sssca1P56873 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sssca1P56873 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sssca1P56873 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sssca1P56873 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC9.26□□□□□ -0.93
Sssca1P56873 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Sssca1P56873 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sssca1P56873 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Sssca1P56873 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Sssca1P56873 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Sssca1P56873 Gm19178-201ENSMUST00000217524 1819 ntBASIC9.26□□□□□ -0.93
Sssca1P56873 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Sssca1P56873 AC154314.2-201ENSMUST00000223677 3502 ntBASIC9.26□□□□□ -0.93
Sssca1P56873 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sssca1P56873 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Sssca1P56873 Gm42602-201ENSMUST00000200288 3224 ntBASIC9.26□□□□□ -0.93
Sssca1P56873 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sssca1P56873 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Sssca1P56873 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms