Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdx1P52946 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.36□□□□□ -0.59
Pdx1P52946 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.36□□□□□ -0.59
Pdx1P52946 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pdx1P52946 Gm43068-201ENSMUST00000201095 1273 ntBASIC11.36□□□□□ -0.59
Pdx1P52946 Gm44008-201ENSMUST00000204345 412 ntBASIC11.36□□□□□ -0.59
Pdx1P52946 Gm17825-201ENSMUST00000206836 794 ntBASIC11.36□□□□□ -0.59
Pdx1P52946 Gm6722-201ENSMUST00000221586 390 ntBASIC11.36□□□□□ -0.59
Pdx1P52946 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.36□□□□□ -0.59
Pdx1P52946 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.36□□□□□ -0.59
Pdx1P52946 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Pdx1P52946 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Pdx1P52946 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC11.36□□□□□ -0.59
Pdx1P52946 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.36□□□□□ -0.59
Pdx1P52946 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Pdx1P52946 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pdx1P52946 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Pdx1P52946 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdx1P52946 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdx1P52946 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Pdx1P52946 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdx1P52946 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdx1P52946 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdx1P52946 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdx1P52946 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pdx1P52946 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pdx1P52946 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.35□□□□□ -0.59
Pdx1P52946 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pdx1P52946 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
Pdx1P52946 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Pdx1P52946 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.35□□□□□ -0.59
Pdx1P52946 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pdx1P52946 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pdx1P52946 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pdx1P52946 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.35□□□□□ -0.59
Pdx1P52946 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pdx1P52946 Gm11836-201ENSMUST00000121022 441 ntBASIC11.35□□□□□ -0.59
Pdx1P52946 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.35□□□□□ -0.59
Pdx1P52946 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pdx1P52946 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.35□□□□□ -0.59
Pdx1P52946 Mir6546-201ENSMUST00000184460 62 ntBASIC11.35□□□□□ -0.59
Pdx1P52946 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.35□□□□□ -0.59
Pdx1P52946 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.35□□□□□ -0.59
Pdx1P52946 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC11.35□□□□□ -0.59
Pdx1P52946 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.35□□□□□ -0.59
Pdx1P52946 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.35□□□□□ -0.59
Pdx1P52946 Gm44100-201ENSMUST00000204329 436 ntBASIC11.35□□□□□ -0.59
Pdx1P52946 Gm5996-201ENSMUST00000211110 718 ntBASIC11.35□□□□□ -0.59
Pdx1P52946 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pdx1P52946 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.35□□□□□ -0.59
Pdx1P52946 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.35□□□□□ -0.59
Pdx1P52946 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.35□□□□□ -0.59
Pdx1P52946 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pdx1P52946 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pdx1P52946 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pdx1P52946 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Pdx1P52946 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pdx1P52946 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pdx1P52946 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pdx1P52946 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pdx1P52946 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Pdx1P52946 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pdx1P52946 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pdx1P52946 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pdx1P52946 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pdx1P52946 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.35□□□□□ -0.59
Pdx1P52946 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pdx1P52946 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pdx1P52946 Gm18642-201ENSMUST00000206642 1400 ntBASIC11.35□□□□□ -0.59
Pdx1P52946 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pdx1P52946 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pdx1P52946 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdx1P52946 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdx1P52946 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Pdx1P52946 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdx1P52946 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pdx1P52946 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.34□□□□□ -0.59
Pdx1P52946 AC166836.1-201ENSMUST00000219933 1795 ntBASIC11.34□□□□□ -0.59
Pdx1P52946 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Pdx1P52946 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdx1P52946 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pdx1P52946 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdx1P52946 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdx1P52946 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Pdx1P52946 Gm13611-201ENSMUST00000118269 318 ntBASIC11.34□□□□□ -0.59
Pdx1P52946 Gm15352-201ENSMUST00000118696 270 ntBASIC11.34□□□□□ -0.59
Pdx1P52946 Gm15573-201ENSMUST00000119487 540 ntBASIC11.34□□□□□ -0.59
Pdx1P52946 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdx1P52946 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.34□□□□□ -0.59
Pdx1P52946 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.34□□□□□ -0.59
Pdx1P52946 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdx1P52946 Gm43378-201ENSMUST00000199336 582 ntBASIC11.34□□□□□ -0.59
Pdx1P52946 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.34□□□□□ -0.59
Pdx1P52946 Gm8574-201ENSMUST00000203207 924 ntBASIC11.34□□□□□ -0.59
Pdx1P52946 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.34□□□□□ -0.59
Pdx1P52946 Gm2517-201ENSMUST00000215651 348 ntBASIC11.34□□□□□ -0.59
Pdx1P52946 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.34□□□□□ -0.59
Pdx1P52946 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.34□□□□□ -0.59
Pdx1P52946 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.34□□□□□ -0.59
Pdx1P52946 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms