Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gli1P47806 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gli1P47806 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.26□□□□□ -0.61
Gli1P47806 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gli1P47806 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gli1P47806 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.26□□□□□ -0.61
Gli1P47806 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Gli1P47806 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gli1P47806 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Gli1P47806 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gli1P47806 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gli1P47806 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.25□□□□□ -0.61
Gli1P47806 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gli1P47806 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.25□□□□□ -0.61
Gli1P47806 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Gli1P47806 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.25□□□□□ -0.61
Gli1P47806 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gli1P47806 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gli1P47806 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gli1P47806 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Gli1P47806 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Gli1P47806 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gli1P47806 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gli1P47806 Gm11700-201ENSMUST00000119409 403 ntBASIC11.25□□□□□ -0.61
Gli1P47806 Gm14832-201ENSMUST00000121289 322 ntBASIC11.25□□□□□ -0.61
Gli1P47806 Gm12164-201ENSMUST00000121695 551 ntBASIC11.25□□□□□ -0.61
Gli1P47806 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.25□□□□□ -0.61
Gli1P47806 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gli1P47806 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC11.25□□□□□ -0.61
Gli1P47806 Gm24845-201ENSMUST00000158034 109 ntBASIC11.25□□□□□ -0.61
Gli1P47806 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.25□□□□□ -0.61
Gli1P47806 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gli1P47806 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Gli1P47806 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Gli1P47806 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gli1P47806 Gm27627-201ENSMUST00000183644 150 ntBASIC11.25□□□□□ -0.61
Gli1P47806 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.25□□□□□ -0.61
Gli1P47806 Gm5051-201ENSMUST00000204085 485 ntBASIC11.25□□□□□ -0.61
Gli1P47806 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Gli1P47806 D9Wsu149-201ENSMUST00000214169 594 ntBASIC11.25□□□□□ -0.61
Gli1P47806 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.25□□□□□ -0.61
Gli1P47806 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.25□□□□□ -0.61
Gli1P47806 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC11.25□□□□□ -0.61
Gli1P47806 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gli1P47806 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gli1P47806 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gli1P47806 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gli1P47806 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.25□□□□□ -0.61
Gli1P47806 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gli1P47806 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.25□□□□□ -0.61
Gli1P47806 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gli1P47806 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gli1P47806 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gli1P47806 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gli1P47806 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Gli1P47806 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gli1P47806 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.25□□□□□ -0.61
Gli1P47806 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.25□□□□□ -0.61
Gli1P47806 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gli1P47806 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Gli1P47806 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.25□□□□□ -0.61
Gli1P47806 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gli1P47806 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.25□□□□□ -0.61
Gli1P47806 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
Gli1P47806 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Gli1P47806 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gli1P47806 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Gli1P47806 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gli1P47806 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Gli1P47806 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.24□□□□□ -0.61
Gli1P47806 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gli1P47806 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gli1P47806 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gli1P47806 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gli1P47806 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Gli1P47806 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gli1P47806 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gli1P47806 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gli1P47806 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Gli1P47806 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Gli1P47806 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Gli1P47806 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gli1P47806 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gli1P47806 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Gli1P47806 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.24□□□□□ -0.61
Gli1P47806 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.24□□□□□ -0.61
Gli1P47806 Gm7722-201ENSMUST00000120646 741 ntBASIC11.24□□□□□ -0.61
Gli1P47806 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.24□□□□□ -0.61
Gli1P47806 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.24□□□□□ -0.61
Gli1P47806 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Gli1P47806 Gm18734-201ENSMUST00000172937 808 ntBASIC11.24□□□□□ -0.61
Gli1P47806 Gm19459-201ENSMUST00000176240 835 ntBASIC11.24□□□□□ -0.61
Gli1P47806 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gli1P47806 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Gli1P47806 Gm45598-202ENSMUST00000210719 986 ntBASIC11.24□□□□□ -0.61
Gli1P47806 Gm2594-201ENSMUST00000214774 742 ntBASIC11.24□□□□□ -0.61
Gli1P47806 Gm19994-201ENSMUST00000217086 586 ntBASIC11.24□□□□□ -0.61
Gli1P47806 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.24□□□□□ -0.61
Gli1P47806 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gli1P47806 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms