Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox18P43680 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox18P43680 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC11.32□□□□□ -0.6
Sox18P43680 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC11.32□□□□□ -0.6
Sox18P43680 Gm43177-201ENSMUST00000197032 1107 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox18P43680 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Sox18P43680 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC11.32□□□□□ -0.6
Sox18P43680 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox18P43680 Gm3433-201ENSMUST00000210149 1058 ntBASIC11.32□□□□□ -0.6
Sox18P43680 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC11.32□□□□□ -0.6
Sox18P43680 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox18P43680 Olfr125-201ENSMUST00000050255 1118 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Sox18P43680 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox18P43680 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox18P43680 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox18P43680 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox18P43680 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Sox18P43680 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox18P43680 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox18P43680 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox18P43680 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox18P43680 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox18P43680 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.32□□□□□ -0.6
Sox18P43680 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox18P43680 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox18P43680 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Sox18P43680 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Sox18P43680 Ctdspl2-203ENSMUST00000110574 1616 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Sox18P43680 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox18P43680 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox18P43680 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Sox18P43680 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC11.31□□□□□ -0.6
Sox18P43680 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox18P43680 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sox18P43680 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox18P43680 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.31□□□□□ -0.6
Sox18P43680 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.31□□□□□ -0.6
Sox18P43680 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.31□□□□□ -0.6
Sox18P43680 Gm22846-201ENSMUST00000157706 270 ntBASIC11.31□□□□□ -0.6
Sox18P43680 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Sox18P43680 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Sox18P43680 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC11.31□□□□□ -0.6
Sox18P43680 Gm42511-201ENSMUST00000196160 234 ntBASIC11.31□□□□□ -0.6
Sox18P43680 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Sox18P43680 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.31□□□□□ -0.6
Sox18P43680 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC11.31□□□□□ -0.6
Sox18P43680 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox18P43680 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Sox18P43680 Gm16380-201ENSMUST00000077997 478 ntBASIC11.31□□□□□ -0.6
Sox18P43680 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox18P43680 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox18P43680 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox18P43680 Gm7961-201ENSMUST00000201338 1436 ntBASIC11.31□□□□□ -0.6
Sox18P43680 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sox18P43680 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Sox18P43680 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.31□□□□□ -0.6
Sox18P43680 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox18P43680 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Sox18P43680 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox18P43680 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox18P43680 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox18P43680 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Sox18P43680 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox18P43680 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox18P43680 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox18P43680 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox18P43680 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox18P43680 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Sox18P43680 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox18P43680 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox18P43680 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sox18P43680 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.3□□□□□ -0.6
Sox18P43680 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sox18P43680 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox18P43680 Gm37960-201ENSMUST00000192402 1897 ntBASIC11.3□□□□□ -0.6
Sox18P43680 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox18P43680 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox18P43680 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox18P43680 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox18P43680 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sox18P43680 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox18P43680 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Sox18P43680 Gm13117-201ENSMUST00000120894 691 ntBASIC11.3□□□□□ -0.6
Sox18P43680 Gm12164-201ENSMUST00000121695 551 ntBASIC11.3□□□□□ -0.6
Sox18P43680 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox18P43680 Gm12453-201ENSMUST00000121981 331 ntBASIC11.3□□□□□ -0.6
Sox18P43680 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox18P43680 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox18P43680 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sox18P43680 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC11.3□□□□□ -0.6
Sox18P43680 Gm13499-201ENSMUST00000142804 603 ntTSL 3 BASIC11.3□□□□□ -0.6
Sox18P43680 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC11.3□□□□□ -0.6
Sox18P43680 Gm24248-201ENSMUST00000157321 322 ntBASIC11.3□□□□□ -0.6
Sox18P43680 Gm3150-201ENSMUST00000166418 204 ntBASIC11.3□□□□□ -0.6
Sox18P43680 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC11.3□□□□□ -0.6
Sox18P43680 Gm20852-202ENSMUST00000188011 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox18P43680 Gm19587-201ENSMUST00000191395 545 ntBASIC11.3□□□□□ -0.6
Sox18P43680 Gm38283-201ENSMUST00000193041 695 ntBASIC11.3□□□□□ -0.6
Sox18P43680 Gm42452-201ENSMUST00000199749 617 ntBASIC11.3□□□□□ -0.6
Sox18P43680 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms