Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm16301-201ENSMUST00000161959 295 ntBASIC11.82□□□□□ -0.52
HttP42859 Gm35239-201ENSMUST00000218346 487 ntTSL 3 BASIC11.82□□□□□ -0.52
HttP42859 BC048562-201ENSMUST00000057265 690 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HttP42859 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
HttP42859 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HttP42859 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HttP42859 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
HttP42859 Gm19027-201ENSMUST00000187291 1355 ntBASIC11.82□□□□□ -0.52
HttP42859 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
HttP42859 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HttP42859 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HttP42859 Gm15031-201ENSMUST00000121341 210 ntBASIC11.82□□□□□ -0.52
HttP42859 Gm26532-201ENSMUST00000180630 690 ntBASIC11.82□□□□□ -0.52
HttP42859 Btg4-202ENSMUST00000213117 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
HttP42859 AC154806.7-201ENSMUST00000227998 202 ntBASIC11.82□□□□□ -0.52
HttP42859 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
HttP42859 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HttP42859 Prdx3-201ENSMUST00000025961 1478 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HttP42859 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
HttP42859 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HttP42859 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
HttP42859 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
HttP42859 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HttP42859 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
HttP42859 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HttP42859 Olfr62-201ENSMUST00000102666 949 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
HttP42859 Gm23899-201ENSMUST00000158112 90 ntBASIC11.82□□□□□ -0.52
HttP42859 Nrxn1-214ENSMUST00000173222 859 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
HttP42859 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC11.82□□□□□ -0.52
HttP42859 3830406C13Rik-205ENSMUST00000223702 900 ntBASIC11.82□□□□□ -0.52
HttP42859 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HttP42859 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.81□□□□□ -0.52
HttP42859 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HttP42859 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
HttP42859 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HttP42859 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC11.81□□□□□ -0.52
HttP42859 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HttP42859 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HttP42859 Gm13191-201ENSMUST00000136489 416 ntTSL 3 BASIC11.81□□□□□ -0.52
HttP42859 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC11.81□□□□□ -0.52
HttP42859 Ppp1r2-ps1-201ENSMUST00000178232 621 ntBASIC11.81□□□□□ -0.52
HttP42859 Ppp1r2-ps6-201ENSMUST00000179333 621 ntBASIC11.81□□□□□ -0.52
HttP42859 1700063D05Rik-203ENSMUST00000191461 666 ntTSL 2 BASIC11.81□□□□□ -0.52
HttP42859 Gm44649-202ENSMUST00000206896 635 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HttP42859 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
HttP42859 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
HttP42859 AC140381.2-201ENSMUST00000217935 1260 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HttP42859 Gm35298-201ENSMUST00000222719 430 ntTSL 5 BASIC11.81□□□□□ -0.52
HttP42859 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
HttP42859 Olfr1535-201ENSMUST00000068163 981 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
HttP42859 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HttP42859 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.81□□□□□ -0.52
HttP42859 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HttP42859 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.81□□□□□ -0.52
HttP42859 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
HttP42859 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HttP42859 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HttP42859 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HttP42859 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HttP42859 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HttP42859 AC153524.2-202ENSMUST00000220401 1794 ntBASIC11.81□□□□□ -0.52
HttP42859 Gm2492-201ENSMUST00000221355 1394 ntBASIC11.81□□□□□ -0.52
HttP42859 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
HttP42859 Ppp1r2-ps4-201ENSMUST00000112182 633 ntBASIC11.81□□□□□ -0.52
HttP42859 Crisp4-203ENSMUST00000115344 960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
HttP42859 Gm11191-201ENSMUST00000117231 610 ntBASIC11.81□□□□□ -0.52
HttP42859 Gm14111-201ENSMUST00000119851 999 ntBASIC11.81□□□□□ -0.52
HttP42859 Gm12037-201ENSMUST00000123160 308 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HttP42859 Gm13857-201ENSMUST00000139645 173 ntBASIC11.81□□□□□ -0.52
HttP42859 Gm38301-201ENSMUST00000195573 543 ntBASIC11.81□□□□□ -0.52
HttP42859 Gm31678-201ENSMUST00000198262 454 ntTSL 3 BASIC11.81□□□□□ -0.52
HttP42859 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
HttP42859 Gm44716-201ENSMUST00000209007 710 ntBASIC11.81□□□□□ -0.52
HttP42859 AC130217.1-201ENSMUST00000224146 909 ntBASIC11.81□□□□□ -0.52
HttP42859 Gm8055-201ENSMUST00000099956 1008 ntBASIC11.81□□□□□ -0.52
HttP42859 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
HttP42859 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HttP42859 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
HttP42859 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.81□□□□□ -0.52
HttP42859 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
HttP42859 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HttP42859 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HttP42859 Gm11929-201ENSMUST00000118175 945 ntBASIC11.8□□□□□ -0.52
HttP42859 Gm15339-201ENSMUST00000153577 506 ntTSL 3 BASIC11.8□□□□□ -0.52
HttP42859 Gm18443-201ENSMUST00000185358 556 ntBASIC11.8□□□□□ -0.52
HttP42859 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HttP42859 Gm10020-201ENSMUST00000081993 612 ntBASIC11.8□□□□□ -0.52
HttP42859 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
HttP42859 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
HttP42859 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
HttP42859 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HttP42859 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.8□□□□□ -0.52
HttP42859 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
HttP42859 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
HttP42859 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HttP42859 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.8□□□□□ -0.52
HttP42859 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
HttP42859 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HttP42859 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
HttP42859 Gm15702-201ENSMUST00000119680 444 ntBASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms