Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.82□□□□□ -0.68
Sox6P40645 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox6P40645 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox6P40645 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox6P40645 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Sox6P40645 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox6P40645 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox6P40645 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Sox6P40645 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Sox6P40645 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Sox6P40645 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox6P40645 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC10.82□□□□□ -0.68
Sox6P40645 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox6P40645 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC10.82□□□□□ -0.68
Sox6P40645 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox6P40645 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Sox6P40645 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox6P40645 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox6P40645 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.82□□□□□ -0.68
Sox6P40645 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox6P40645 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox6P40645 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox6P40645 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Sox6P40645 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC10.82□□□□□ -0.68
Sox6P40645 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.82□□□□□ -0.68
Sox6P40645 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox6P40645 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox6P40645 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox6P40645 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox6P40645 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Sox6P40645 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox6P40645 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox6P40645 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Sox6P40645 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
Sox6P40645 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox6P40645 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC10.81□□□□□ -0.68
Sox6P40645 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Sox6P40645 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC10.81□□□□□ -0.68
Sox6P40645 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sox6P40645 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox6P40645 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox6P40645 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC10.81□□□□□ -0.68
Sox6P40645 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sox6P40645 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sox6P40645 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox6P40645 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox6P40645 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sox6P40645 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.81□□□□□ -0.68
Sox6P40645 Gm7722-201ENSMUST00000120646 741 ntBASIC10.81□□□□□ -0.68
Sox6P40645 Gm14247-201ENSMUST00000120950 237 ntBASIC10.81□□□□□ -0.68
Sox6P40645 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.81□□□□□ -0.68
Sox6P40645 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC10.81□□□□□ -0.68
Sox6P40645 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sox6P40645 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Sox6P40645 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC10.81□□□□□ -0.68
Sox6P40645 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC10.81□□□□□ -0.68
Sox6P40645 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.81□□□□□ -0.68
Sox6P40645 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Sox6P40645 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.81□□□□□ -0.68
Sox6P40645 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sox6P40645 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.81□□□□□ -0.68
Sox6P40645 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox6P40645 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox6P40645 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox6P40645 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Sox6P40645 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox6P40645 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sox6P40645 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox6P40645 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC10.81□□□□□ -0.68
Sox6P40645 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.81□□□□□ -0.68
Sox6P40645 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sox6P40645 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox6P40645 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox6P40645 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sox6P40645 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.81□□□□□ -0.68
Sox6P40645 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC10.81□□□□□ -0.68
Sox6P40645 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox6P40645 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC10.81□□□□□ -0.68
Sox6P40645 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sox6P40645 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sox6P40645 AC123738.2-201ENSMUST00000223791 1899 ntBASIC10.81□□□□□ -0.68
Sox6P40645 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Sox6P40645 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox6P40645 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox6P40645 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sox6P40645 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox6P40645 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sox6P40645 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox6P40645 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox6P40645 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox6P40645 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox6P40645 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox6P40645 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox6P40645 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Sox6P40645 Gm15610-201ENSMUST00000120584 195 ntBASIC10.8□□□□□ -0.68
Sox6P40645 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sox6P40645 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox6P40645 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox6P40645 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox6P40645 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms