Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcl12P40224 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcl12P40224 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cxcl12P40224 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcl12P40224 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Cxcl12P40224 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcl12P40224 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.83□□□□□ -0.52
Cxcl12P40224 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC11.83□□□□□ -0.52
Cxcl12P40224 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcl12P40224 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcl12P40224 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcl12P40224 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcl12P40224 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcl12P40224 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cxcl12P40224 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcl12P40224 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.82□□□□□ -0.52
Cxcl12P40224 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcl12P40224 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcl12P40224 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcl12P40224 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Cxcl12P40224 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcl12P40224 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcl12P40224 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcl12P40224 Gm11960-201ENSMUST00000122068 925 ntBASIC11.82□□□□□ -0.52
Cxcl12P40224 Gm26313-201ENSMUST00000157770 308 ntBASIC11.82□□□□□ -0.52
Cxcl12P40224 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcl12P40224 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cxcl12P40224 Gm25872-201ENSMUST00000177784 100 ntBASIC11.82□□□□□ -0.52
Cxcl12P40224 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcl12P40224 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC11.82□□□□□ -0.52
Cxcl12P40224 Gm37851-201ENSMUST00000193871 889 ntBASIC11.82□□□□□ -0.52
Cxcl12P40224 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC11.82□□□□□ -0.52
Cxcl12P40224 Gm18001-201ENSMUST00000212023 688 ntBASIC11.82□□□□□ -0.52
Cxcl12P40224 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcl12P40224 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Cxcl12P40224 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcl12P40224 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcl12P40224 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcl12P40224 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.82□□□□□ -0.52
Cxcl12P40224 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.82□□□□□ -0.52
Cxcl12P40224 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcl12P40224 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcl12P40224 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcl12P40224 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcl12P40224 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcl12P40224 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cxcl12P40224 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcl12P40224 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcl12P40224 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcl12P40224 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcl12P40224 Gm43167-201ENSMUST00000202001 1606 ntBASIC11.82□□□□□ -0.52
Cxcl12P40224 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Cxcl12P40224 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cxcl12P40224 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Cxcl12P40224 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl12P40224 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl12P40224 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl12P40224 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl12P40224 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl12P40224 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.81□□□□□ -0.52
Cxcl12P40224 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl12P40224 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl12P40224 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cxcl12P40224 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cxcl12P40224 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.81□□□□□ -0.52
Cxcl12P40224 Gm22495-201ENSMUST00000104492 126 ntBASIC11.81□□□□□ -0.52
Cxcl12P40224 Gm6758-201ENSMUST00000119643 1055 ntBASIC11.81□□□□□ -0.52
Cxcl12P40224 Gm15815-201ENSMUST00000120569 255 ntBASIC11.81□□□□□ -0.52
Cxcl12P40224 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC11.81□□□□□ -0.52
Cxcl12P40224 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC11.81□□□□□ -0.52
Cxcl12P40224 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC11.81□□□□□ -0.52
Cxcl12P40224 Gm24294-201ENSMUST00000158295 277 ntBASIC11.81□□□□□ -0.52
Cxcl12P40224 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl12P40224 Cd9-ps-201ENSMUST00000174687 650 ntBASIC11.81□□□□□ -0.52
Cxcl12P40224 Zcwpw2-203ENSMUST00000187803 372 ntBASIC11.81□□□□□ -0.52
Cxcl12P40224 Gm20781-201ENSMUST00000193154 693 ntBASIC11.81□□□□□ -0.52
Cxcl12P40224 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl12P40224 Gm21736-201ENSMUST00000195399 693 ntBASIC11.81□□□□□ -0.52
Cxcl12P40224 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC11.81□□□□□ -0.52
Cxcl12P40224 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC11.81□□□□□ -0.52
Cxcl12P40224 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC11.81□□□□□ -0.52
Cxcl12P40224 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC11.81□□□□□ -0.52
Cxcl12P40224 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl12P40224 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl12P40224 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl12P40224 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cxcl12P40224 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl12P40224 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Cxcl12P40224 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl12P40224 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cxcl12P40224 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl12P40224 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl12P40224 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl12P40224 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl12P40224 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl12P40224 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.81□□□□□ -0.52
Cxcl12P40224 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Cxcl12P40224 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.81□□□□□ -0.52
Cxcl12P40224 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl12P40224 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms