Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rfc1P35601 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rfc1P35601 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Rfc1P35601 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rfc1P35601 AU041133-202ENSMUST00000201286 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rfc1P35601 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.11□□□□□ -0.47
Rfc1P35601 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rfc1P35601 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rfc1P35601 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Rfc1P35601 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rfc1P35601 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rfc1P35601 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rfc1P35601 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rfc1P35601 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rfc1P35601 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.11□□□□□ -0.47
Rfc1P35601 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rfc1P35601 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rfc1P35601 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rfc1P35601 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.11□□□□□ -0.47
Rfc1P35601 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.11□□□□□ -0.47
Rfc1P35601 Gm13326-201ENSMUST00000118730 1011 ntBASIC12.11□□□□□ -0.47
Rfc1P35601 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rfc1P35601 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rfc1P35601 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rfc1P35601 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.11□□□□□ -0.47
Rfc1P35601 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rfc1P35601 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.11□□□□□ -0.47
Rfc1P35601 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rfc1P35601 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rfc1P35601 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Rfc1P35601 Gm27023-201ENSMUST00000182372 285 ntBASIC12.11□□□□□ -0.47
Rfc1P35601 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.11□□□□□ -0.47
Rfc1P35601 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.11□□□□□ -0.47
Rfc1P35601 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.11□□□□□ -0.47
Rfc1P35601 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rfc1P35601 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.11□□□□□ -0.47
Rfc1P35601 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rfc1P35601 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rfc1P35601 Gpr35-202ENSMUST00000064480 3409 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rfc1P35601 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC12.11□□□□□ -0.47
Rfc1P35601 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rfc1P35601 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rfc1P35601 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rfc1P35601 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rfc1P35601 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rfc1P35601 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Rfc1P35601 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rfc1P35601 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Rfc1P35601 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rfc1P35601 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rfc1P35601 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rfc1P35601 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC12.1□□□□□ -0.47
Rfc1P35601 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rfc1P35601 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.1□□□□□ -0.47
Rfc1P35601 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rfc1P35601 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rfc1P35601 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rfc1P35601 Gm43112-201ENSMUST00000196665 3122 ntBASIC12.1□□□□□ -0.47
Rfc1P35601 Gm43372-201ENSMUST00000202662 3016 ntBASIC12.1□□□□□ -0.47
Rfc1P35601 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rfc1P35601 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rfc1P35601 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.1□□□□□ -0.47
Rfc1P35601 Mir1247-201ENSMUST00000116706 82 ntBASIC12.1□□□□□ -0.47
Rfc1P35601 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.1□□□□□ -0.47
Rfc1P35601 Gm13570-201ENSMUST00000140763 309 ntBASIC12.1□□□□□ -0.47
Rfc1P35601 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rfc1P35601 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Rfc1P35601 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rfc1P35601 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.1□□□□□ -0.47
Rfc1P35601 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.1□□□□□ -0.47
Rfc1P35601 Gm37424-201ENSMUST00000191727 561 ntBASIC12.1□□□□□ -0.47
Rfc1P35601 Gm38158-201ENSMUST00000194617 339 ntBASIC12.1□□□□□ -0.47
Rfc1P35601 Gm43133-201ENSMUST00000197472 463 ntBASIC12.1□□□□□ -0.47
Rfc1P35601 Gm18062-201ENSMUST00000208020 547 ntBASIC12.1□□□□□ -0.47
Rfc1P35601 Gm18055-201ENSMUST00000208254 547 ntBASIC12.1□□□□□ -0.47
Rfc1P35601 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.1□□□□□ -0.47
Rfc1P35601 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Rfc1P35601 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rfc1P35601 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC12.1□□□□□ -0.47
Rfc1P35601 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rfc1P35601 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Rfc1P35601 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rfc1P35601 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rfc1P35601 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rfc1P35601 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rfc1P35601 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Rfc1P35601 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rfc1P35601 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rfc1P35601 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Rfc1P35601 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rfc1P35601 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rfc1P35601 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rfc1P35601 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfc1P35601 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfc1P35601 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.09□□□□□ -0.47
Rfc1P35601 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfc1P35601 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfc1P35601 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfc1P35601 Gm42971-201ENSMUST00000199228 2079 ntBASIC12.09□□□□□ -0.47
Rfc1P35601 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms