Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col2a1P28481 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col2a1P28481 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col2a1P28481 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col2a1P28481 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Col2a1P28481 Gm13981-201ENSMUST00000122360 447 ntBASIC12.9□□□□□ -0.34
Col2a1P28481 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col2a1P28481 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col2a1P28481 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Col2a1P28481 Gm45500-201ENSMUST00000211676 803 ntBASIC12.9□□□□□ -0.34
Col2a1P28481 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col2a1P28481 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col2a1P28481 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC12.9□□□□□ -0.34
Col2a1P28481 AC134601.2-201ENSMUST00000221071 130 ntBASIC12.9□□□□□ -0.34
Col2a1P28481 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col2a1P28481 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col2a1P28481 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col2a1P28481 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col2a1P28481 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col2a1P28481 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Col2a1P28481 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col2a1P28481 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Col2a1P28481 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.9□□□□□ -0.35
Col2a1P28481 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Col2a1P28481 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Col2a1P28481 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Col2a1P28481 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col2a1P28481 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col2a1P28481 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.89□□□□□ -0.35
Col2a1P28481 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col2a1P28481 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col2a1P28481 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Col2a1P28481 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col2a1P28481 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col2a1P28481 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Col2a1P28481 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col2a1P28481 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col2a1P28481 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col2a1P28481 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col2a1P28481 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col2a1P28481 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col2a1P28481 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC12.89□□□□□ -0.35
Col2a1P28481 Gm11578-201ENSMUST00000118530 459 ntBASIC12.89□□□□□ -0.35
Col2a1P28481 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Col2a1P28481 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC12.89□□□□□ -0.35
Col2a1P28481 Gm14993-201ENSMUST00000121180 164 ntBASIC12.89□□□□□ -0.35
Col2a1P28481 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col2a1P28481 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col2a1P28481 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col2a1P28481 Gm9372-201ENSMUST00000168454 430 ntBASIC12.89□□□□□ -0.35
Col2a1P28481 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col2a1P28481 Gm26272-201ENSMUST00000179241 132 ntBASIC12.89□□□□□ -0.35
Col2a1P28481 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC12.89□□□□□ -0.35
Col2a1P28481 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col2a1P28481 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Col2a1P28481 Gm7880-201ENSMUST00000203748 871 ntBASIC12.89□□□□□ -0.35
Col2a1P28481 Gm43969-201ENSMUST00000204833 535 ntBASIC12.89□□□□□ -0.35
Col2a1P28481 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC12.89□□□□□ -0.35
Col2a1P28481 AC154435.1-201ENSMUST00000223938 959 ntBASIC12.89□□□□□ -0.35
Col2a1P28481 AC102847.1-202ENSMUST00000226313 1245 ntBASIC12.89□□□□□ -0.35
Col2a1P28481 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col2a1P28481 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col2a1P28481 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col2a1P28481 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Col2a1P28481 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col2a1P28481 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col2a1P28481 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col2a1P28481 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col2a1P28481 Gm14005-210ENSMUST00000225087 1413 ntBASIC12.89□□□□□ -0.35
Col2a1P28481 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col2a1P28481 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col2a1P28481 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col2a1P28481 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col2a1P28481 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.88□□□□□ -0.35
Col2a1P28481 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC12.88□□□□□ -0.35
Col2a1P28481 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col2a1P28481 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Col2a1P28481 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Col2a1P28481 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col2a1P28481 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col2a1P28481 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col2a1P28481 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Col2a1P28481 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col2a1P28481 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col2a1P28481 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col2a1P28481 Gm16547-201ENSMUST00000159474 293 ntBASIC12.88□□□□□ -0.35
Col2a1P28481 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC12.88□□□□□ -0.35
Col2a1P28481 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC12.88□□□□□ -0.35
Col2a1P28481 Gm5267-201ENSMUST00000191574 1045 ntBASIC12.88□□□□□ -0.35
Col2a1P28481 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col2a1P28481 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC12.88□□□□□ -0.35
Col2a1P28481 Gm7183-201ENSMUST00000213870 1005 ntBASIC12.88□□□□□ -0.35
Col2a1P28481 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col2a1P28481 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col2a1P28481 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col2a1P28481 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Col2a1P28481 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col2a1P28481 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col2a1P28481 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col2a1P28481 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms