Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gm38266-201ENSMUST00000194931 421 ntBASIC11.07□□□□□ -0.64
BdnfP21237 Gm19187-201ENSMUST00000206781 892 ntBASIC11.07□□□□□ -0.64
BdnfP21237 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
BdnfP21237 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
BdnfP21237 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
BdnfP21237 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.07□□□□□ -0.64
BdnfP21237 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
BdnfP21237 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
BdnfP21237 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
BdnfP21237 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
BdnfP21237 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
BdnfP21237 AC125409.1-201ENSMUST00000223213 3370 ntBASIC11.07□□□□□ -0.64
BdnfP21237 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
BdnfP21237 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
BdnfP21237 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
BdnfP21237 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.07□□□□□ -0.64
BdnfP21237 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
BdnfP21237 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.07□□□□□ -0.64
BdnfP21237 Mtfr1-204ENSMUST00000130645 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
BdnfP21237 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.07□□□□□ -0.64
BdnfP21237 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.06□□□□□ -0.64
BdnfP21237 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
BdnfP21237 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.06□□□□□ -0.64
BdnfP21237 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.06□□□□□ -0.64
BdnfP21237 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
BdnfP21237 Piwil1-202ENSMUST00000195959 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
BdnfP21237 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
BdnfP21237 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
BdnfP21237 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
BdnfP21237 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.06□□□□□ -0.64
BdnfP21237 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
BdnfP21237 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.06□□□□□ -0.64
BdnfP21237 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.06□□□□□ -0.64
BdnfP21237 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
BdnfP21237 Idua-202ENSMUST00000112563 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
BdnfP21237 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
BdnfP21237 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
BdnfP21237 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.06□□□□□ -0.64
BdnfP21237 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
BdnfP21237 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
BdnfP21237 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
BdnfP21237 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
BdnfP21237 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
BdnfP21237 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.06□□□□□ -0.64
BdnfP21237 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
BdnfP21237 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.06□□□□□ -0.64
BdnfP21237 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
BdnfP21237 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
BdnfP21237 Gm43630-201ENSMUST00000201550 776 ntBASIC11.06□□□□□ -0.64
BdnfP21237 Gm45598-202ENSMUST00000210719 986 ntBASIC11.06□□□□□ -0.64
BdnfP21237 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.06□□□□□ -0.64
BdnfP21237 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.06□□□□□ -0.64
BdnfP21237 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
BdnfP21237 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.06□□□□□ -0.64
BdnfP21237 Gm807-202ENSMUST00000224929 408 ntBASIC11.06□□□□□ -0.64
BdnfP21237 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
BdnfP21237 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
BdnfP21237 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
BdnfP21237 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
BdnfP21237 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
BdnfP21237 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.06□□□□□ -0.64
BdnfP21237 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
BdnfP21237 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
BdnfP21237 Tmem63a-201ENSMUST00000027800 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
BdnfP21237 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
BdnfP21237 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
BdnfP21237 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
BdnfP21237 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
BdnfP21237 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.06□□□□□ -0.64
BdnfP21237 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
BdnfP21237 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
BdnfP21237 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
BdnfP21237 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.06□□□□□ -0.64
BdnfP21237 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.06□□□□□ -0.64
BdnfP21237 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
BdnfP21237 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
BdnfP21237 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
BdnfP21237 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
BdnfP21237 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
BdnfP21237 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
BdnfP21237 Rgr-203ENSMUST00000225070 4704 ntBASIC11.06□□□□□ -0.64
BdnfP21237 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.06□□□□□ -0.64
BdnfP21237 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
BdnfP21237 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
BdnfP21237 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
BdnfP21237 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
BdnfP21237 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.05□□□□□ -0.64
BdnfP21237 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
BdnfP21237 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
BdnfP21237 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
BdnfP21237 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
BdnfP21237 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
BdnfP21237 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
BdnfP21237 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
BdnfP21237 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.05□□□□□ -0.64
BdnfP21237 Sqor-202ENSMUST00000110506 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
BdnfP21237 Gm12576-201ENSMUST00000135268 3036 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
BdnfP21237 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
BdnfP21237 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
BdnfP21237 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms