Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp6P0C0A3 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp6P0C0A3 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.54□□□□□ -0.4
Chmp6P0C0A3 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp6P0C0A3 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp6P0C0A3 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp6P0C0A3 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.54□□□□□ -0.4
Chmp6P0C0A3 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp6P0C0A3 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Chmp6P0C0A3 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp6P0C0A3 Gm23699-201ENSMUST00000158835 135 ntBASIC12.54□□□□□ -0.4
Chmp6P0C0A3 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.54□□□□□ -0.4
Chmp6P0C0A3 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Chmp6P0C0A3 Gm8815-201ENSMUST00000173809 620 ntBASIC12.54□□□□□ -0.4
Chmp6P0C0A3 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.54□□□□□ -0.4
Chmp6P0C0A3 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Chmp6P0C0A3 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp6P0C0A3 Gm28937-201ENSMUST00000185413 695 ntBASIC12.54□□□□□ -0.4
Chmp6P0C0A3 Gm29400-201ENSMUST00000187208 695 ntBASIC12.54□□□□□ -0.4
Chmp6P0C0A3 Gm28662-201ENSMUST00000188446 695 ntBASIC12.54□□□□□ -0.4
Chmp6P0C0A3 Gm28251-201ENSMUST00000188835 695 ntBASIC12.54□□□□□ -0.4
Chmp6P0C0A3 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp6P0C0A3 Gm37318-201ENSMUST00000194325 695 ntBASIC12.54□□□□□ -0.4
Chmp6P0C0A3 Gm38017-201ENSMUST00000194768 695 ntBASIC12.54□□□□□ -0.4
Chmp6P0C0A3 Gm37287-201ENSMUST00000195449 695 ntBASIC12.54□□□□□ -0.4
Chmp6P0C0A3 Gm37793-201ENSMUST00000195548 695 ntBASIC12.54□□□□□ -0.4
Chmp6P0C0A3 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.54□□□□□ -0.4
Chmp6P0C0A3 Gm6450-201ENSMUST00000200896 574 ntBASIC12.54□□□□□ -0.4
Chmp6P0C0A3 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp6P0C0A3 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Chmp6P0C0A3 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp6P0C0A3 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp6P0C0A3 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp6P0C0A3 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp6P0C0A3 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Chmp6P0C0A3 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Chmp6P0C0A3 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.54□□□□□ -0.4
Chmp6P0C0A3 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp6P0C0A3 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.54□□□□□ -0.4
Chmp6P0C0A3 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp6P0C0A3 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp6P0C0A3 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Chmp6P0C0A3 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp6P0C0A3 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp6P0C0A3 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp6P0C0A3 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
Chmp6P0C0A3 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp6P0C0A3 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp6P0C0A3 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp6P0C0A3 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp6P0C0A3 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp6P0C0A3 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp6P0C0A3 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp6P0C0A3 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp6P0C0A3 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.53□□□□□ -0.4
Chmp6P0C0A3 Gm23251-201ENSMUST00000103773 110 ntBASIC12.53□□□□□ -0.4
Chmp6P0C0A3 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Chmp6P0C0A3 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.53□□□□□ -0.4
Chmp6P0C0A3 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.53□□□□□ -0.4
Chmp6P0C0A3 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.53□□□□□ -0.4
Chmp6P0C0A3 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp6P0C0A3 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Chmp6P0C0A3 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.53□□□□□ -0.4
Chmp6P0C0A3 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.53□□□□□ -0.4
Chmp6P0C0A3 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.53□□□□□ -0.4
Chmp6P0C0A3 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.53□□□□□ -0.4
Chmp6P0C0A3 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.53□□□□□ -0.4
Chmp6P0C0A3 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp6P0C0A3 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp6P0C0A3 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp6P0C0A3 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp6P0C0A3 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp6P0C0A3 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Chmp6P0C0A3 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.53□□□□□ -0.4
Chmp6P0C0A3 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp6P0C0A3 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.53□□□□□ -0.4
Chmp6P0C0A3 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Chmp6P0C0A3 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp6P0C0A3 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp6P0C0A3 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp6P0C0A3 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Chmp6P0C0A3 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Chmp6P0C0A3 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Chmp6P0C0A3 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.52□□□□□ -0.4
Chmp6P0C0A3 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
Chmp6P0C0A3 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Chmp6P0C0A3 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Chmp6P0C0A3 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Chmp6P0C0A3 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC12.52□□□□□ -0.4
Chmp6P0C0A3 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Chmp6P0C0A3 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp6P0C0A3 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp6P0C0A3 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp6P0C0A3 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp6P0C0A3 Gm37422-201ENSMUST00000193794 4718 ntBASIC12.52□□□□□ -0.41
Chmp6P0C0A3 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp6P0C0A3 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp6P0C0A3 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp6P0C0A3 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp6P0C0A3 Gm9062-201ENSMUST00000117712 727 ntBASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 125.4 ms