Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.23
Col3a1P08121 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Col3a1P08121 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Col3a1P08121 Gm43127-201ENSMUST00000195890 2789 ntBASIC13.58□□□□□ -0.24
Col3a1P08121 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col3a1P08121 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC13.58□□□□□ -0.24
Col3a1P08121 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col3a1P08121 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC13.58□□□□□ -0.24
Col3a1P08121 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col3a1P08121 Gm14213-201ENSMUST00000119778 768 ntBASIC13.58□□□□□ -0.24
Col3a1P08121 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC13.58□□□□□ -0.24
Col3a1P08121 Gm25830-201ENSMUST00000158923 132 ntBASIC13.58□□□□□ -0.24
Col3a1P08121 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col3a1P08121 Gm17070-201ENSMUST00000170463 784 ntBASIC13.58□□□□□ -0.24
Col3a1P08121 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Col3a1P08121 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Col3a1P08121 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Col3a1P08121 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Col3a1P08121 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Col3a1P08121 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Col3a1P08121 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Col3a1P08121 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Col3a1P08121 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC13.58□□□□□ -0.24
Col3a1P08121 Gm42430-201ENSMUST00000197209 616 ntBASIC13.58□□□□□ -0.24
Col3a1P08121 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col3a1P08121 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col3a1P08121 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col3a1P08121 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col3a1P08121 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col3a1P08121 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col3a1P08121 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC13.58□□□□□ -0.24
Col3a1P08121 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col3a1P08121 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col3a1P08121 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col3a1P08121 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col3a1P08121 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Col3a1P08121 Gm5641-201ENSMUST00000091130 1488 ntBASIC13.58□□□□□ -0.24
Col3a1P08121 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col3a1P08121 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col3a1P08121 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col3a1P08121 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Col3a1P08121 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC13.57□□□□□ -0.24
Col3a1P08121 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Col3a1P08121 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col3a1P08121 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col3a1P08121 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col3a1P08121 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC13.57□□□□□ -0.24
Col3a1P08121 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col3a1P08121 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC13.57□□□□□ -0.24
Col3a1P08121 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col3a1P08121 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col3a1P08121 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col3a1P08121 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col3a1P08121 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col3a1P08121 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Col3a1P08121 Gm15003-201ENSMUST00000118884 446 ntBASIC13.57□□□□□ -0.24
Col3a1P08121 Gm12129-201ENSMUST00000120104 1147 ntBASIC13.57□□□□□ -0.24
Col3a1P08121 Gm11952-201ENSMUST00000121172 821 ntBASIC13.57□□□□□ -0.24
Col3a1P08121 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC13.57□□□□□ -0.24
Col3a1P08121 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC13.57□□□□□ -0.24
Col3a1P08121 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col3a1P08121 Gm24328-201ENSMUST00000175104 67 ntBASIC13.57□□□□□ -0.24
Col3a1P08121 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC13.57□□□□□ -0.24
Col3a1P08121 Gm42779-201ENSMUST00000198807 406 ntBASIC13.57□□□□□ -0.24
Col3a1P08121 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC13.57□□□□□ -0.24
Col3a1P08121 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col3a1P08121 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC13.57□□□□□ -0.24
Col3a1P08121 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Col3a1P08121 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Col3a1P08121 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col3a1P08121 Gm7964-201ENSMUST00000051522 1378 ntBASIC13.57□□□□□ -0.24
Col3a1P08121 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col3a1P08121 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col3a1P08121 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Col3a1P08121 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Col3a1P08121 Gm6641-201ENSMUST00000196100 1315 ntBASIC13.57□□□□□ -0.24
Col3a1P08121 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col3a1P08121 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col3a1P08121 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.56□□□□□ -0.24
Col3a1P08121 AC174797.1-201ENSMUST00000224339 1649 ntBASIC13.56□□□□□ -0.24
Col3a1P08121 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col3a1P08121 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Col3a1P08121 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col3a1P08121 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col3a1P08121 Gm6158-201ENSMUST00000109467 904 ntBASIC13.56□□□□□ -0.24
Col3a1P08121 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col3a1P08121 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col3a1P08121 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Col3a1P08121 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Col3a1P08121 Gm20414-201ENSMUST00000172918 646 ntBASIC13.56□□□□□ -0.24
Col3a1P08121 Gm7719-201ENSMUST00000182374 975 ntBASIC13.56□□□□□ -0.24
Col3a1P08121 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col3a1P08121 Gm37365-201ENSMUST00000193109 409 ntBASIC13.56□□□□□ -0.24
Col3a1P08121 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Col3a1P08121 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col3a1P08121 AC102569.1-201ENSMUST00000221563 685 ntBASIC13.56□□□□□ -0.24
Col3a1P08121 CT030166.5-201ENSMUST00000222249 420 ntBASIC13.56□□□□□ -0.24
Col3a1P08121 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col3a1P08121 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col3a1P08121 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms