Protein–RNA interactions for Protein: P06728

Apoa4, Apolipoprotein A-IV, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoa4P06728 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Apoa4P06728 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Apoa4P06728 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Apoa4P06728 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Apoa4P06728 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Apoa4P06728 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Apoa4P06728 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Apoa4P06728 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Apoa4P06728 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.31□□□□□ -0.6
Apoa4P06728 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Apoa4P06728 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Apoa4P06728 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Apoa4P06728 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Apoa4P06728 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Apoa4P06728 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Apoa4P06728 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Apoa4P06728 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Apoa4P06728 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Apoa4P06728 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.31□□□□□ -0.6
Apoa4P06728 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Apoa4P06728 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Apoa4P06728 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Apoa4P06728 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Apoa4P06728 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Apoa4P06728 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Apoa4P06728 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Apoa4P06728 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Apoa4P06728 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Apoa4P06728 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.3□□□□□ -0.6
Apoa4P06728 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Apoa4P06728 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.3□□□□□ -0.6
Apoa4P06728 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Apoa4P06728 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Apoa4P06728 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Apoa4P06728 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Apoa4P06728 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Apoa4P06728 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Apoa4P06728 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Apoa4P06728 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Apoa4P06728 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.3□□□□□ -0.6
Apoa4P06728 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC11.3□□□□□ -0.6
Apoa4P06728 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Apoa4P06728 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Apoa4P06728 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Apoa4P06728 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Apoa4P06728 Gm14130-201ENSMUST00000118417 987 ntBASIC11.3□□□□□ -0.6
Apoa4P06728 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.3□□□□□ -0.6
Apoa4P06728 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.3□□□□□ -0.6
Apoa4P06728 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.3□□□□□ -0.6
Apoa4P06728 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.3□□□□□ -0.6
Apoa4P06728 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.3□□□□□ -0.6
Apoa4P06728 Gm7584-201ENSMUST00000175829 940 ntBASIC11.3□□□□□ -0.6
Apoa4P06728 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.3□□□□□ -0.6
Apoa4P06728 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.3□□□□□ -0.6
Apoa4P06728 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.3□□□□□ -0.6
Apoa4P06728 Gm5982-201ENSMUST00000196234 512 ntBASIC11.3□□□□□ -0.6
Apoa4P06728 Gm6439-201ENSMUST00000199849 862 ntBASIC11.3□□□□□ -0.6
Apoa4P06728 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Apoa4P06728 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Apoa4P06728 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.3□□□□□ -0.6
Apoa4P06728 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Apoa4P06728 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Apoa4P06728 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Apoa4P06728 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Apoa4P06728 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Apoa4P06728 Olfr582-201ENSMUST00000098212 960 ntBASIC11.3□□□□□ -0.6
Apoa4P06728 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Apoa4P06728 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Apoa4P06728 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Apoa4P06728 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Apoa4P06728 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Apoa4P06728 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Apoa4P06728 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Apoa4P06728 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.3□□□□□ -0.6
Apoa4P06728 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Apoa4P06728 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Apoa4P06728 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Apoa4P06728 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Apoa4P06728 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Apoa4P06728 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Apoa4P06728 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Apoa4P06728 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Apoa4P06728 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.29□□□□□ -0.6
Apoa4P06728 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Apoa4P06728 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Apoa4P06728 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.29□□□□□ -0.6
Apoa4P06728 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.29□□□□□ -0.6
Apoa4P06728 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.29□□□□□ -0.6
Apoa4P06728 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.29□□□□□ -0.6
Apoa4P06728 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Apoa4P06728 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Apoa4P06728 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.29□□□□□ -0.6
Apoa4P06728 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Apoa4P06728 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.29□□□□□ -0.6
Apoa4P06728 Gm38117-201ENSMUST00000194653 939 ntBASIC11.29□□□□□ -0.6
Apoa4P06728 Gm18038-201ENSMUST00000197900 485 ntBASIC11.29□□□□□ -0.6
Apoa4P06728 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Apoa4P06728 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.29□□□□□ -0.6
Apoa4P06728 Gm45224-201ENSMUST00000208203 414 ntBASIC11.29□□□□□ -0.6
Apoa4P06728 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms