Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04224 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC10.09□□□□□ -0.79
P04224 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04224 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04224 Tktl2-202ENSMUST00000183187 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04224 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P04224 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
P04224 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04224 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04224 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04224 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04224 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04224 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04224 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04224 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04224 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
P04224 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.09□□□□□ -0.79
P04224 Scml4-201ENSMUST00000063063 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04224 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04224 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04224 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04224 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC10.09□□□□□ -0.79
P04224 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P04224 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.09□□□□□ -0.79
P04224 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC10.09□□□□□ -0.79
P04224 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC10.09□□□□□ -0.79
P04224 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC10.09□□□□□ -0.79
P04224 Gm16379-201ENSMUST00000161469 348 ntBASIC10.09□□□□□ -0.79
P04224 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC10.09□□□□□ -0.79
P04224 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC10.09□□□□□ -0.79
P04224 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC10.09□□□□□ -0.79
P04224 Gm8762-201ENSMUST00000193486 339 ntBASIC10.09□□□□□ -0.79
P04224 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC10.09□□□□□ -0.79
P04224 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04224 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
P04224 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04224 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P04224 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P04224 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04224 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC10.09□□□□□ -0.79
P04224 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.09□□□□□ -0.79
P04224 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04224 Gm6560-201ENSMUST00000198588 1591 ntBASIC10.09□□□□□ -0.79
P04224 Rad51c-202ENSMUST00000067692 3944 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04224 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04224 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04224 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P04224 Gm42602-201ENSMUST00000200288 3224 ntBASIC10.09□□□□□ -0.79
P04224 Gm11298-201ENSMUST00000120503 1799 ntBASIC10.09□□□□□ -0.79
P04224 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P04224 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
P04224 Gm10463-202ENSMUST00000195772 2889 ntBASIC10.08□□□□□ -0.8
P04224 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
P04224 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
P04224 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC10.08□□□□□ -0.8
P04224 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P04224 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
P04224 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
P04224 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
P04224 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
P04224 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
P04224 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
P04224 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
P04224 Gm12799-201ENSMUST00000118151 2560 ntBASIC10.08□□□□□ -0.8
P04224 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
P04224 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC10.08□□□□□ -0.8
P04224 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
P04224 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
P04224 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC10.08□□□□□ -0.8
P04224 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
P04224 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC10.08□□□□□ -0.8
P04224 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC10.08□□□□□ -0.8
P04224 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
P04224 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P04224 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P04224 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P04224 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
P04224 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
P04224 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
P04224 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC10.08□□□□□ -0.8
P04224 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
P04224 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
P04224 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
P04224 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
P04224 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC10.08□□□□□ -0.8
P04224 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC10.08□□□□□ -0.8
P04224 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC10.08□□□□□ -0.8
P04224 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
P04224 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
P04224 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P04224 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P04224 Gm12846-201ENSMUST00000120431 1373 ntBASIC10.08□□□□□ -0.8
P04224 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
P04224 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P04224 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
P04224 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
P04224 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
P04224 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC10.08□□□□□ -0.8
P04224 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P04224 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC10.08□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms