Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Vti1aO89116 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vti1aO89116 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.46□□□□□ -0.41
Vti1aO89116 Gm2594-201ENSMUST00000214774 742 ntBASIC12.46□□□□□ -0.41
Vti1aO89116 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vti1aO89116 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vti1aO89116 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vti1aO89116 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vti1aO89116 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vti1aO89116 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Vti1aO89116 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.46□□□□□ -0.42
Vti1aO89116 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Vti1aO89116 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vti1aO89116 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vti1aO89116 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vti1aO89116 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vti1aO89116 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vti1aO89116 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vti1aO89116 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vti1aO89116 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vti1aO89116 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vti1aO89116 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vti1aO89116 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vti1aO89116 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vti1aO89116 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vti1aO89116 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC12.45□□□□□ -0.42
Vti1aO89116 Gm11340-201ENSMUST00000119226 412 ntBASIC12.45□□□□□ -0.42
Vti1aO89116 Gm11783-201ENSMUST00000119549 885 ntBASIC12.45□□□□□ -0.42
Vti1aO89116 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.45□□□□□ -0.42
Vti1aO89116 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.45□□□□□ -0.42
Vti1aO89116 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vti1aO89116 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC12.45□□□□□ -0.42
Vti1aO89116 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vti1aO89116 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vti1aO89116 Gm21092-201ENSMUST00000178995 955 ntBASIC12.45□□□□□ -0.42
Vti1aO89116 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.45□□□□□ -0.42
Vti1aO89116 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vti1aO89116 Gm12407-201ENSMUST00000180219 324 ntBASIC12.45□□□□□ -0.42
Vti1aO89116 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vti1aO89116 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vti1aO89116 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vti1aO89116 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.45□□□□□ -0.42
Vti1aO89116 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Vti1aO89116 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vti1aO89116 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Vti1aO89116 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vti1aO89116 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.45□□□□□ -0.42
Vti1aO89116 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vti1aO89116 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vti1aO89116 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vti1aO89116 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Vti1aO89116 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Vti1aO89116 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Vti1aO89116 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vti1aO89116 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vti1aO89116 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vti1aO89116 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Vti1aO89116 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vti1aO89116 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vti1aO89116 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vti1aO89116 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Vti1aO89116 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vti1aO89116 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vti1aO89116 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.44□□□□□ -0.42
Vti1aO89116 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vti1aO89116 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Vti1aO89116 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.44□□□□□ -0.42
Vti1aO89116 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Vti1aO89116 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vti1aO89116 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vti1aO89116 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Vti1aO89116 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vti1aO89116 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vti1aO89116 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vti1aO89116 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vti1aO89116 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.44□□□□□ -0.42
Vti1aO89116 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.44□□□□□ -0.42
Vti1aO89116 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vti1aO89116 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vti1aO89116 Gm25076-201ENSMUST00000104098 132 ntBASIC12.44□□□□□ -0.42
Vti1aO89116 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC12.44□□□□□ -0.42
Vti1aO89116 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.44□□□□□ -0.42
Vti1aO89116 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vti1aO89116 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vti1aO89116 Gm12899-201ENSMUST00000120565 551 ntBASIC12.44□□□□□ -0.42
Vti1aO89116 Gm7150-201ENSMUST00000122032 981 ntBASIC12.44□□□□□ -0.42
Vti1aO89116 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC12.44□□□□□ -0.42
Vti1aO89116 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Vti1aO89116 Mir1956-201ENSMUST00000157748 65 ntBASIC12.44□□□□□ -0.42
Vti1aO89116 Gm24398-201ENSMUST00000157870 109 ntBASIC12.44□□□□□ -0.42
Vti1aO89116 Gm24844-201ENSMUST00000158679 127 ntBASIC12.44□□□□□ -0.42
Vti1aO89116 Gm3150-201ENSMUST00000166418 204 ntBASIC12.44□□□□□ -0.42
Vti1aO89116 Gm18367-201ENSMUST00000176139 600 ntBASIC12.44□□□□□ -0.42
Vti1aO89116 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vti1aO89116 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.44□□□□□ -0.42
Vti1aO89116 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vti1aO89116 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Vti1aO89116 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vti1aO89116 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vti1aO89116 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms