Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.66□□□□□ -0.38
Trdmt1O55055 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trdmt1O55055 Gm18499-201ENSMUST00000220808 1021 ntBASIC12.66□□□□□ -0.38
Trdmt1O55055 Id2-203ENSMUST00000222667 958 ntBASIC12.66□□□□□ -0.38
Trdmt1O55055 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trdmt1O55055 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trdmt1O55055 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trdmt1O55055 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trdmt1O55055 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trdmt1O55055 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trdmt1O55055 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trdmt1O55055 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trdmt1O55055 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trdmt1O55055 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trdmt1O55055 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trdmt1O55055 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.66□□□□□ -0.38
Trdmt1O55055 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trdmt1O55055 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trdmt1O55055 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trdmt1O55055 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trdmt1O55055 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trdmt1O55055 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trdmt1O55055 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trdmt1O55055 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trdmt1O55055 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.65□□□□□ -0.38
Trdmt1O55055 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trdmt1O55055 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trdmt1O55055 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trdmt1O55055 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trdmt1O55055 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trdmt1O55055 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trdmt1O55055 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trdmt1O55055 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Trdmt1O55055 Gm12453-201ENSMUST00000121981 331 ntBASIC12.65□□□□□ -0.38
Trdmt1O55055 Gm25343-201ENSMUST00000157460 107 ntBASIC12.65□□□□□ -0.38
Trdmt1O55055 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trdmt1O55055 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC12.65□□□□□ -0.38
Trdmt1O55055 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trdmt1O55055 Gm42430-201ENSMUST00000197209 616 ntBASIC12.65□□□□□ -0.38
Trdmt1O55055 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trdmt1O55055 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.65□□□□□ -0.38
Trdmt1O55055 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC12.65□□□□□ -0.38
Trdmt1O55055 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trdmt1O55055 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trdmt1O55055 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trdmt1O55055 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trdmt1O55055 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trdmt1O55055 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trdmt1O55055 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trdmt1O55055 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trdmt1O55055 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trdmt1O55055 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trdmt1O55055 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trdmt1O55055 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trdmt1O55055 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trdmt1O55055 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Trdmt1O55055 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trdmt1O55055 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Trdmt1O55055 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.65□□□□□ -0.39
Trdmt1O55055 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trdmt1O55055 Gm44106-201ENSMUST00000203153 1599 ntBASIC12.64□□□□□ -0.39
Trdmt1O55055 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC12.64□□□□□ -0.39
Trdmt1O55055 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trdmt1O55055 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trdmt1O55055 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trdmt1O55055 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trdmt1O55055 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trdmt1O55055 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trdmt1O55055 Gm25562-201ENSMUST00000104608 133 ntBASIC12.64□□□□□ -0.39
Trdmt1O55055 Gm6158-201ENSMUST00000109467 904 ntBASIC12.64□□□□□ -0.39
Trdmt1O55055 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trdmt1O55055 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC12.64□□□□□ -0.39
Trdmt1O55055 Gm7541-201ENSMUST00000118361 535 ntBASIC12.64□□□□□ -0.39
Trdmt1O55055 Gm12948-201ENSMUST00000119406 682 ntBASIC12.64□□□□□ -0.39
Trdmt1O55055 Gm11502-201ENSMUST00000120917 1211 ntBASIC12.64□□□□□ -0.39
Trdmt1O55055 Gm14165-201ENSMUST00000121456 952 ntBASIC12.64□□□□□ -0.39
Trdmt1O55055 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC12.64□□□□□ -0.39
Trdmt1O55055 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trdmt1O55055 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trdmt1O55055 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC12.64□□□□□ -0.39
Trdmt1O55055 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trdmt1O55055 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC12.64□□□□□ -0.39
Trdmt1O55055 Mir6941-201ENSMUST00000184711 59 ntBASIC12.64□□□□□ -0.39
Trdmt1O55055 Gm5870-201ENSMUST00000196461 282 ntBASIC12.64□□□□□ -0.39
Trdmt1O55055 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.64□□□□□ -0.39
Trdmt1O55055 Gm9102-201ENSMUST00000219250 465 ntBASIC12.64□□□□□ -0.39
Trdmt1O55055 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC12.64□□□□□ -0.39
Trdmt1O55055 Capsl-202ENSMUST00000226688 739 ntBASIC12.64□□□□□ -0.39
Trdmt1O55055 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trdmt1O55055 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trdmt1O55055 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC12.64□□□□□ -0.39
Trdmt1O55055 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trdmt1O55055 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trdmt1O55055 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trdmt1O55055 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trdmt1O55055 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC12.64□□□□□ -0.39
Trdmt1O55055 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trdmt1O55055 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trdmt1O55055 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trdmt1O55055 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms