Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Itgb3O54890 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.2□□□□□ -0.46
Itgb3O54890 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC12.2□□□□□ -0.46
Itgb3O54890 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.2□□□□□ -0.46
Itgb3O54890 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Itgb3O54890 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Itgb3O54890 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Itgb3O54890 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Itgb3O54890 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Itgb3O54890 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Itgb3O54890 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.2□□□□□ -0.46
Itgb3O54890 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Itgb3O54890 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Itgb3O54890 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Itgb3O54890 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Itgb3O54890 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Itgb3O54890 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.19□□□□□ -0.46
Itgb3O54890 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Itgb3O54890 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Itgb3O54890 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Itgb3O54890 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Itgb3O54890 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Itgb3O54890 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Itgb3O54890 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Itgb3O54890 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Itgb3O54890 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC12.19□□□□□ -0.46
Itgb3O54890 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Itgb3O54890 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Itgb3O54890 Gm4294-201ENSMUST00000105169 614 ntBASIC12.19□□□□□ -0.46
Itgb3O54890 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC12.19□□□□□ -0.46
Itgb3O54890 Gm1848-201ENSMUST00000120711 789 ntBASIC12.19□□□□□ -0.46
Itgb3O54890 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Itgb3O54890 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Itgb3O54890 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.19□□□□□ -0.46
Itgb3O54890 Gm44329-201ENSMUST00000197469 112 ntBASIC12.19□□□□□ -0.46
Itgb3O54890 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Itgb3O54890 Gm44545-201ENSMUST00000208262 746 ntBASIC12.19□□□□□ -0.46
Itgb3O54890 Gm6653-201ENSMUST00000218063 1288 ntBASIC12.19□□□□□ -0.46
Itgb3O54890 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.19□□□□□ -0.46
Itgb3O54890 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC12.19□□□□□ -0.46
Itgb3O54890 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Itgb3O54890 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Itgb3O54890 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Itgb3O54890 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC12.19□□□□□ -0.46
Itgb3O54890 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Itgb3O54890 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Itgb3O54890 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Itgb3O54890 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Itgb3O54890 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Itgb3O54890 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Itgb3O54890 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Itgb3O54890 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Itgb3O54890 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Itgb3O54890 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Itgb3O54890 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Itgb3O54890 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Itgb3O54890 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Itgb3O54890 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Itgb3O54890 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Itgb3O54890 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.18□□□□□ -0.46
Itgb3O54890 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Itgb3O54890 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Itgb3O54890 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Itgb3O54890 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Itgb3O54890 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Itgb3O54890 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Itgb3O54890 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC12.18□□□□□ -0.46
Itgb3O54890 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC12.18□□□□□ -0.46
Itgb3O54890 Gm14665-201ENSMUST00000122294 557 ntBASIC12.18□□□□□ -0.46
Itgb3O54890 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Itgb3O54890 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Itgb3O54890 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Itgb3O54890 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC12.18□□□□□ -0.46
Itgb3O54890 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Itgb3O54890 Gm37905-201ENSMUST00000195310 341 ntBASIC12.18□□□□□ -0.46
Itgb3O54890 Gm37826-201ENSMUST00000195329 322 ntBASIC12.18□□□□□ -0.46
Itgb3O54890 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC12.18□□□□□ -0.46
Itgb3O54890 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC12.18□□□□□ -0.46
Itgb3O54890 Gm2875-201ENSMUST00000211333 360 ntBASIC12.18□□□□□ -0.46
Itgb3O54890 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC12.18□□□□□ -0.46
Itgb3O54890 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.18□□□□□ -0.46
Itgb3O54890 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Itgb3O54890 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Itgb3O54890 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Itgb3O54890 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Itgb3O54890 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Itgb3O54890 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Itgb3O54890 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Itgb3O54890 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Itgb3O54890 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Itgb3O54890 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.18□□□□□ -0.46
Itgb3O54890 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Itgb3O54890 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Itgb3O54890 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Itgb3O54890 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Itgb3O54890 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Itgb3O54890 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Itgb3O54890 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Itgb3O54890 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Itgb3O54890 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms