Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 Gm20495-201ENSMUST00000173902 235 ntBASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdh9F8VPK8 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdh9F8VPK8 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.77□□□□□ -0.52
Pcdh9F8VPK8 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdh9F8VPK8 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdh9F8VPK8 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Pcdh9F8VPK8 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Pcdh9F8VPK8 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.77□□□□□ -0.52
Pcdh9F8VPK8 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdh9F8VPK8 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.77□□□□□ -0.52
Pcdh9F8VPK8 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Pcdh9F8VPK8 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh9F8VPK8 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.77□□□□□ -0.53
Pcdh9F8VPK8 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh9F8VPK8 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.77□□□□□ -0.53
Pcdh9F8VPK8 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.77□□□□□ -0.53
Pcdh9F8VPK8 Gm15808-201ENSMUST00000119046 604 ntBASIC11.77□□□□□ -0.53
Pcdh9F8VPK8 Gm7150-201ENSMUST00000122032 981 ntBASIC11.77□□□□□ -0.53
Pcdh9F8VPK8 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh9F8VPK8 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.77□□□□□ -0.53
Pcdh9F8VPK8 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.77□□□□□ -0.53
Pcdh9F8VPK8 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.77□□□□□ -0.53
Pcdh9F8VPK8 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh9F8VPK8 Gm24749-201ENSMUST00000157838 343 ntBASIC11.77□□□□□ -0.53
Pcdh9F8VPK8 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh9F8VPK8 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh9F8VPK8 Gm3332-201ENSMUST00000189337 928 ntBASIC11.77□□□□□ -0.53
Pcdh9F8VPK8 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.77□□□□□ -0.53
Pcdh9F8VPK8 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh9F8VPK8 Gm5714-201ENSMUST00000197343 566 ntBASIC11.77□□□□□ -0.53
Pcdh9F8VPK8 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.77□□□□□ -0.53
Pcdh9F8VPK8 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.77□□□□□ -0.53
Pcdh9F8VPK8 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.77□□□□□ -0.53
Pcdh9F8VPK8 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh9F8VPK8 Gm4978-201ENSMUST00000071565 801 ntBASIC11.77□□□□□ -0.53
Pcdh9F8VPK8 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Pcdh9F8VPK8 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
Pcdh9F8VPK8 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.77□□□□□ -0.53
Pcdh9F8VPK8 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Pcdh9F8VPK8 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh9F8VPK8 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh9F8VPK8 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh9F8VPK8 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh9F8VPK8 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh9F8VPK8 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh9F8VPK8 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh9F8VPK8 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh9F8VPK8 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh9F8VPK8 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh9F8VPK8 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Pcdh9F8VPK8 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh9F8VPK8 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh9F8VPK8 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh9F8VPK8 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.77□□□□□ -0.53
Pcdh9F8VPK8 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh9F8VPK8 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Pcdh9F8VPK8 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms