Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Syngap1F6SEU4 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Syngap1F6SEU4 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Syngap1F6SEU4 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Syngap1F6SEU4 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Syngap1F6SEU4 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Syngap1F6SEU4 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.99□□□□□ -0.33
Syngap1F6SEU4 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Syngap1F6SEU4 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Syngap1F6SEU4 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Syngap1F6SEU4 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Syngap1F6SEU4 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Syngap1F6SEU4 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Syngap1F6SEU4 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Syngap1F6SEU4 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Syngap1F6SEU4 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Syngap1F6SEU4 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Syngap1F6SEU4 Gm18210-201ENSMUST00000209001 1524 ntBASIC12.98□□□□□ -0.33
Syngap1F6SEU4 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Syngap1F6SEU4 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Syngap1F6SEU4 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.98□□□□□ -0.33
Syngap1F6SEU4 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Syngap1F6SEU4 Paupar-201ENSMUST00000194826 3482 ntBASIC12.98□□□□□ -0.33
Syngap1F6SEU4 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.98□□□□□ -0.33
Syngap1F6SEU4 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Syngap1F6SEU4 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Syngap1F6SEU4 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Syngap1F6SEU4 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.98□□□□□ -0.33
Syngap1F6SEU4 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC12.98□□□□□ -0.33
Syngap1F6SEU4 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC12.98□□□□□ -0.33
Syngap1F6SEU4 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC12.98□□□□□ -0.33
Syngap1F6SEU4 Gm24844-201ENSMUST00000158679 127 ntBASIC12.98□□□□□ -0.33
Syngap1F6SEU4 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC12.98□□□□□ -0.33
Syngap1F6SEU4 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC12.98□□□□□ -0.33
Syngap1F6SEU4 Gm20694-201ENSMUST00000176943 404 ntBASIC12.98□□□□□ -0.33
Syngap1F6SEU4 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.98□□□□□ -0.33
Syngap1F6SEU4 Gm12407-201ENSMUST00000180219 324 ntBASIC12.98□□□□□ -0.33
Syngap1F6SEU4 Gm26875-201ENSMUST00000181006 950 ntBASIC12.98□□□□□ -0.33
Syngap1F6SEU4 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Syngap1F6SEU4 Gm5335-201ENSMUST00000182995 1000 ntBASIC12.98□□□□□ -0.33
Syngap1F6SEU4 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC12.98□□□□□ -0.33
Syngap1F6SEU4 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Syngap1F6SEU4 Gm6423-201ENSMUST00000204315 934 ntBASIC12.98□□□□□ -0.33
Syngap1F6SEU4 Gm45094-201ENSMUST00000207013 617 ntBASIC12.98□□□□□ -0.33
Syngap1F6SEU4 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Syngap1F6SEU4 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.98□□□□□ -0.33
Syngap1F6SEU4 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Syngap1F6SEU4 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.98□□□□□ -0.33
Syngap1F6SEU4 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Syngap1F6SEU4 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Syngap1F6SEU4 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Syngap1F6SEU4 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Syngap1F6SEU4 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.98□□□□□ -0.33
Syngap1F6SEU4 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Syngap1F6SEU4 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Syngap1F6SEU4 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Syngap1F6SEU4 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Syngap1F6SEU4 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Syngap1F6SEU4 Cog3-203ENSMUST00000227473 4197 ntBASIC12.97□□□□□ -0.33
Syngap1F6SEU4 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Syngap1F6SEU4 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Syngap1F6SEU4 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Syngap1F6SEU4 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Syngap1F6SEU4 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Syngap1F6SEU4 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.97□□□□□ -0.33
Syngap1F6SEU4 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Syngap1F6SEU4 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Syngap1F6SEU4 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Syngap1F6SEU4 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Syngap1F6SEU4 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Syngap1F6SEU4 Gm25053-201ENSMUST00000103982 133 ntBASIC12.97□□□□□ -0.33
Syngap1F6SEU4 Gm25922-201ENSMUST00000104281 130 ntBASIC12.97□□□□□ -0.33
Syngap1F6SEU4 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC12.97□□□□□ -0.33
Syngap1F6SEU4 Gm13171-201ENSMUST00000117233 391 ntBASIC12.97□□□□□ -0.33
Syngap1F6SEU4 Gm11619-201ENSMUST00000117474 237 ntBASIC12.97□□□□□ -0.33
Syngap1F6SEU4 Gm11996-201ENSMUST00000117538 915 ntBASIC12.97□□□□□ -0.33
Syngap1F6SEU4 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Syngap1F6SEU4 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC12.97□□□□□ -0.33
Syngap1F6SEU4 Gm24679-201ENSMUST00000158762 111 ntBASIC12.97□□□□□ -0.33
Syngap1F6SEU4 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Syngap1F6SEU4 Gm18367-201ENSMUST00000176139 600 ntBASIC12.97□□□□□ -0.33
Syngap1F6SEU4 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC12.97□□□□□ -0.33
Syngap1F6SEU4 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Syngap1F6SEU4 Gm25053-202ENSMUST00000199731 132 ntBASIC12.97□□□□□ -0.33
Syngap1F6SEU4 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.97□□□□□ -0.33
Syngap1F6SEU4 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.97□□□□□ -0.33
Syngap1F6SEU4 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Syngap1F6SEU4 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Syngap1F6SEU4 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Syngap1F6SEU4 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Syngap1F6SEU4 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Syngap1F6SEU4 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.97□□□□□ -0.33
Syngap1F6SEU4 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Syngap1F6SEU4 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.97□□□□□ -0.33
Syngap1F6SEU4 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Syngap1F6SEU4 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Syngap1F6SEU4 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Syngap1F6SEU4 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Syngap1F6SEU4 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Syngap1F6SEU4 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms