Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hfm1D3Z4R1 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Hfm1D3Z4R1 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Hfm1D3Z4R1 Gm5739-201ENSMUST00000208601 1703 ntBASIC15.94■□□□□ 0.14
Hfm1D3Z4R1 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hfm1D3Z4R1 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Hfm1D3Z4R1 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hfm1D3Z4R1 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hfm1D3Z4R1 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Hfm1D3Z4R1 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hfm1D3Z4R1 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Hfm1D3Z4R1 Gm18555-201ENSMUST00000197935 584 ntBASIC15.94■□□□□ 0.14
Hfm1D3Z4R1 Gm7183-201ENSMUST00000213870 1005 ntBASIC15.94■□□□□ 0.14
Hfm1D3Z4R1 CT030195.2-201ENSMUST00000226074 1286 ntBASIC15.94■□□□□ 0.14
Hfm1D3Z4R1 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
Hfm1D3Z4R1 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Hfm1D3Z4R1 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hfm1D3Z4R1 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Hfm1D3Z4R1 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hfm1D3Z4R1 Gm44153-201ENSMUST00000204162 1580 ntBASIC15.93■□□□□ 0.14
Hfm1D3Z4R1 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Hfm1D3Z4R1 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
Hfm1D3Z4R1 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Hfm1D3Z4R1 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hfm1D3Z4R1 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Hfm1D3Z4R1 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hfm1D3Z4R1 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hfm1D3Z4R1 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hfm1D3Z4R1 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Hfm1D3Z4R1 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Hfm1D3Z4R1 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Hfm1D3Z4R1 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Hfm1D3Z4R1 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hfm1D3Z4R1 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
Hfm1D3Z4R1 Gm17836-201ENSMUST00000191976 1302 ntBASIC15.93■□□□□ 0.14
Hfm1D3Z4R1 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hfm1D3Z4R1 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Hfm1D3Z4R1 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hfm1D3Z4R1 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hfm1D3Z4R1 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Hfm1D3Z4R1 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Hfm1D3Z4R1 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC15.93■□□□□ 0.14
Hfm1D3Z4R1 Gm4943-201ENSMUST00000132879 424 ntBASIC15.93■□□□□ 0.14
Hfm1D3Z4R1 Mir1941-201ENSMUST00000157834 83 ntBASIC15.93■□□□□ 0.14
Hfm1D3Z4R1 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC15.93■□□□□ 0.14
Hfm1D3Z4R1 Gm36982-201ENSMUST00000193796 1128 ntBASIC15.93■□□□□ 0.14
Hfm1D3Z4R1 Gm29808-201ENSMUST00000194419 468 ntBASIC15.93■□□□□ 0.14
Hfm1D3Z4R1 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Hfm1D3Z4R1 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hfm1D3Z4R1 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hfm1D3Z4R1 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Hfm1D3Z4R1 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hfm1D3Z4R1 Gm5159-201ENSMUST00000212733 1652 ntBASIC15.92■□□□□ 0.14
Hfm1D3Z4R1 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hfm1D3Z4R1 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hfm1D3Z4R1 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Hfm1D3Z4R1 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hfm1D3Z4R1 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hfm1D3Z4R1 Gm43570-201ENSMUST00000199951 3688 ntBASIC15.92■□□□□ 0.14
Hfm1D3Z4R1 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hfm1D3Z4R1 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Hfm1D3Z4R1 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC15.92■□□□□ 0.14
Hfm1D3Z4R1 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
Hfm1D3Z4R1 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC15.92■□□□□ 0.14
Hfm1D3Z4R1 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC15.92■□□□□ 0.14
Hfm1D3Z4R1 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC15.92■□□□□ 0.14
Hfm1D3Z4R1 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC15.92■□□□□ 0.14
Hfm1D3Z4R1 Gm8226-201ENSMUST00000190511 798 ntBASIC15.92■□□□□ 0.14
Hfm1D3Z4R1 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Hfm1D3Z4R1 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hfm1D3Z4R1 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC15.92■□□□□ 0.14
Hfm1D3Z4R1 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC15.92■□□□□ 0.14
Hfm1D3Z4R1 AC117769.1-201ENSMUST00000224716 1120 ntBASIC15.92■□□□□ 0.14
Hfm1D3Z4R1 AC154477.1-201ENSMUST00000226515 773 ntBASIC15.92■□□□□ 0.14
Hfm1D3Z4R1 AC137842.2-201ENSMUST00000227734 797 ntBASIC15.92■□□□□ 0.14
Hfm1D3Z4R1 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hfm1D3Z4R1 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Hfm1D3Z4R1 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Hfm1D3Z4R1 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Hfm1D3Z4R1 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hfm1D3Z4R1 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Hfm1D3Z4R1 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Hfm1D3Z4R1 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Hfm1D3Z4R1 Ntrk2-204ENSMUST00000224259 3049 ntBASIC15.91■□□□□ 0.14
Hfm1D3Z4R1 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hfm1D3Z4R1 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Hfm1D3Z4R1 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hfm1D3Z4R1 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hfm1D3Z4R1 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC15.91■□□□□ 0.14
Hfm1D3Z4R1 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC15.91■□□□□ 0.14
Hfm1D3Z4R1 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hfm1D3Z4R1 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC15.91■□□□□ 0.14
Hfm1D3Z4R1 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hfm1D3Z4R1 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hfm1D3Z4R1 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hfm1D3Z4R1 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Hfm1D3Z4R1 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hfm1D3Z4R1 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hfm1D3Z4R1 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hfm1D3Z4R1 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms