Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Scn3aA2ASI5 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Scn3aA2ASI5 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn3aA2ASI5 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Scn3aA2ASI5 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Scn3aA2ASI5 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC12.71□□□□□ -0.37
Scn3aA2ASI5 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC12.71□□□□□ -0.37
Scn3aA2ASI5 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Scn3aA2ASI5 Gm22846-201ENSMUST00000157706 270 ntBASIC12.71□□□□□ -0.37
Scn3aA2ASI5 Gm16165-201ENSMUST00000160140 795 ntBASIC12.71□□□□□ -0.37
Scn3aA2ASI5 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Scn3aA2ASI5 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn3aA2ASI5 Gm26272-201ENSMUST00000179241 132 ntBASIC12.71□□□□□ -0.37
Scn3aA2ASI5 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC12.71□□□□□ -0.37
Scn3aA2ASI5 AC115304.2-201ENSMUST00000226399 332 ntBASIC12.71□□□□□ -0.37
Scn3aA2ASI5 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn3aA2ASI5 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn3aA2ASI5 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn3aA2ASI5 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn3aA2ASI5 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn3aA2ASI5 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Scn3aA2ASI5 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn3aA2ASI5 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Scn3aA2ASI5 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Scn3aA2ASI5 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Scn3aA2ASI5 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Scn3aA2ASI5 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Scn3aA2ASI5 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Scn3aA2ASI5 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Scn3aA2ASI5 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Scn3aA2ASI5 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Scn3aA2ASI5 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Scn3aA2ASI5 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Scn3aA2ASI5 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Scn3aA2ASI5 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Scn3aA2ASI5 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Scn3aA2ASI5 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Scn3aA2ASI5 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn3aA2ASI5 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC12.7□□□□□ -0.38
Scn3aA2ASI5 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC12.7□□□□□ -0.38
Scn3aA2ASI5 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC12.7□□□□□ -0.38
Scn3aA2ASI5 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC12.7□□□□□ -0.38
Scn3aA2ASI5 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC12.7□□□□□ -0.38
Scn3aA2ASI5 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Scn3aA2ASI5 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn3aA2ASI5 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn3aA2ASI5 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Scn3aA2ASI5 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.7□□□□□ -0.38
Scn3aA2ASI5 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn3aA2ASI5 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn3aA2ASI5 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn3aA2ASI5 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn3aA2ASI5 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn3aA2ASI5 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn3aA2ASI5 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn3aA2ASI5 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn3aA2ASI5 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Scn3aA2ASI5 Gm42815-201ENSMUST00000198787 1470 ntBASIC12.7□□□□□ -0.38
Scn3aA2ASI5 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Scn3aA2ASI5 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn3aA2ASI5 Gm11560-201ENSMUST00000117567 948 ntBASIC12.7□□□□□ -0.38
Scn3aA2ASI5 Gm12986-201ENSMUST00000119037 967 ntBASIC12.7□□□□□ -0.38
Scn3aA2ASI5 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Scn3aA2ASI5 Gm20392-201ENSMUST00000173047 701 ntBASIC12.7□□□□□ -0.38
Scn3aA2ASI5 AC124457.1-201ENSMUST00000198845 120 ntBASIC12.7□□□□□ -0.38
Scn3aA2ASI5 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC12.7□□□□□ -0.38
Scn3aA2ASI5 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Scn3aA2ASI5 AC168279.1-201ENSMUST00000214611 382 ntBASIC12.7□□□□□ -0.38
Scn3aA2ASI5 CT573086.4-201ENSMUST00000226729 342 ntBASIC12.7□□□□□ -0.38
Scn3aA2ASI5 Cog3-203ENSMUST00000227473 4197 ntBASIC12.7□□□□□ -0.38
Scn3aA2ASI5 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn3aA2ASI5 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn3aA2ASI5 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Scn3aA2ASI5 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn3aA2ASI5 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn3aA2ASI5 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Scn3aA2ASI5 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Scn3aA2ASI5 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Scn3aA2ASI5 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Scn3aA2ASI5 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn3aA2ASI5 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Scn3aA2ASI5 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn3aA2ASI5 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn3aA2ASI5 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn3aA2ASI5 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn3aA2ASI5 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn3aA2ASI5 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn3aA2ASI5 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn3aA2ASI5 Gm14592-201ENSMUST00000117201 560 ntBASIC12.69□□□□□ -0.38
Scn3aA2ASI5 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Scn3aA2ASI5 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Scn3aA2ASI5 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Scn3aA2ASI5 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Scn3aA2ASI5 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Scn3aA2ASI5 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC12.69□□□□□ -0.38
Scn3aA2ASI5 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Scn3aA2ASI5 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn3aA2ASI5 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.69□□□□□ -0.38
Scn3aA2ASI5 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn3aA2ASI5 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms