Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cfap99A0A140LIX9 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cfap99A0A140LIX9 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cfap99A0A140LIX9 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC13.78□□□□□ -0.2
Cfap99A0A140LIX9 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cfap99A0A140LIX9 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cfap99A0A140LIX9 Gm43773-201ENSMUST00000198548 2162 ntBASIC13.78□□□□□ -0.2
Cfap99A0A140LIX9 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cfap99A0A140LIX9 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cfap99A0A140LIX9 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cfap99A0A140LIX9 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cfap99A0A140LIX9 Gm14441-201ENSMUST00000121960 540 ntBASIC13.78□□□□□ -0.2
Cfap99A0A140LIX9 Gm12628-201ENSMUST00000122193 382 ntBASIC13.78□□□□□ -0.2
Cfap99A0A140LIX9 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC13.78□□□□□ -0.2
Cfap99A0A140LIX9 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cfap99A0A140LIX9 Gm10731-201ENSMUST00000181171 448 ntBASIC13.78□□□□□ -0.2
Cfap99A0A140LIX9 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC13.78□□□□□ -0.2
Cfap99A0A140LIX9 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cfap99A0A140LIX9 Gm28388-201ENSMUST00000186262 437 ntBASIC13.78□□□□□ -0.2
Cfap99A0A140LIX9 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC13.78□□□□□ -0.2
Cfap99A0A140LIX9 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Cfap99A0A140LIX9 Gm5298-201ENSMUST00000201122 892 ntBASIC13.78□□□□□ -0.2
Cfap99A0A140LIX9 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC13.78□□□□□ -0.2
Cfap99A0A140LIX9 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cfap99A0A140LIX9 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cfap99A0A140LIX9 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cfap99A0A140LIX9 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cfap99A0A140LIX9 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC13.78□□□□□ -0.2
Cfap99A0A140LIX9 Gm26684-202ENSMUST00000228229 8257 ntBASIC13.78□□□□□ -0.2
Cfap99A0A140LIX9 Gm37348-201ENSMUST00000193104 1789 ntBASIC13.78□□□□□ -0.2
Cfap99A0A140LIX9 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Cfap99A0A140LIX9 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cfap99A0A140LIX9 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC13.78□□□□□ -0.2
Cfap99A0A140LIX9 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cfap99A0A140LIX9 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cfap99A0A140LIX9 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cfap99A0A140LIX9 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cfap99A0A140LIX9 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cfap99A0A140LIX9 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cfap99A0A140LIX9 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cfap99A0A140LIX9 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cfap99A0A140LIX9 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cfap99A0A140LIX9 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Cfap99A0A140LIX9 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.2
Cfap99A0A140LIX9 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Cfap99A0A140LIX9 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cfap99A0A140LIX9 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cfap99A0A140LIX9 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC13.77□□□□□ -0.21
Cfap99A0A140LIX9 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC13.77□□□□□ -0.21
Cfap99A0A140LIX9 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC13.77□□□□□ -0.21
Cfap99A0A140LIX9 Gm24844-201ENSMUST00000158679 127 ntBASIC13.77□□□□□ -0.21
Cfap99A0A140LIX9 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cfap99A0A140LIX9 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cfap99A0A140LIX9 Gm6771-201ENSMUST00000182716 1001 ntBASIC13.77□□□□□ -0.21
Cfap99A0A140LIX9 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC13.77□□□□□ -0.21
Cfap99A0A140LIX9 Gm38117-201ENSMUST00000194653 939 ntBASIC13.77□□□□□ -0.21
Cfap99A0A140LIX9 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC13.77□□□□□ -0.21
Cfap99A0A140LIX9 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Cfap99A0A140LIX9 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cfap99A0A140LIX9 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cfap99A0A140LIX9 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cfap99A0A140LIX9 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cfap99A0A140LIX9 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cfap99A0A140LIX9 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cfap99A0A140LIX9 Gm25517-201ENSMUST00000083865 134 ntBASIC13.77□□□□□ -0.21
Cfap99A0A140LIX9 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cfap99A0A140LIX9 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Cfap99A0A140LIX9 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cfap99A0A140LIX9 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.77□□□□□ -0.21
Cfap99A0A140LIX9 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cfap99A0A140LIX9 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC13.76□□□□□ -0.21
Cfap99A0A140LIX9 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cfap99A0A140LIX9 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cfap99A0A140LIX9 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cfap99A0A140LIX9 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cfap99A0A140LIX9 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cfap99A0A140LIX9 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cfap99A0A140LIX9 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cfap99A0A140LIX9 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
Cfap99A0A140LIX9 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cfap99A0A140LIX9 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC13.76□□□□□ -0.21
Cfap99A0A140LIX9 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cfap99A0A140LIX9 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC13.76□□□□□ -0.21
Cfap99A0A140LIX9 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cfap99A0A140LIX9 Gm12407-201ENSMUST00000180219 324 ntBASIC13.76□□□□□ -0.21
Cfap99A0A140LIX9 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC13.76□□□□□ -0.21
Cfap99A0A140LIX9 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC13.76□□□□□ -0.21
Cfap99A0A140LIX9 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Cfap99A0A140LIX9 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cfap99A0A140LIX9 Gm19009-201ENSMUST00000223072 823 ntBASIC13.76□□□□□ -0.21
Cfap99A0A140LIX9 AC166344.1-201ENSMUST00000223745 674 ntBASIC13.76□□□□□ -0.21
Cfap99A0A140LIX9 AC154184.3-201ENSMUST00000225620 1090 ntBASIC13.76□□□□□ -0.21
Cfap99A0A140LIX9 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC13.76□□□□□ -0.21
Cfap99A0A140LIX9 n-R5s211-201ENSMUST00000093689 119 ntBASIC13.76□□□□□ -0.21
Cfap99A0A140LIX9 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cfap99A0A140LIX9 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cfap99A0A140LIX9 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cfap99A0A140LIX9 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cfap99A0A140LIX9 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cfap99A0A140LIX9 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms