Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC10.38□□□□□ -0.75
H2afb3S4R1G7 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Gm6450-201ENSMUST00000200896 574 ntBASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Gm13097-201ENSMUST00000210722 397 ntBASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Gm4157-201ENSMUST00000211647 679 ntBASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Gm37969-201ENSMUST00000195777 3409 ntBASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Gm42853-201ENSMUST00000201273 1387 ntBASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
H2afb3S4R1G7 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
H2afb3S4R1G7 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
H2afb3S4R1G7 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC10.37□□□□□ -0.75
H2afb3S4R1G7 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.37□□□□□ -0.75
H2afb3S4R1G7 Gm43908-201ENSMUST00000205074 1472 ntBASIC10.37□□□□□ -0.75
H2afb3S4R1G7 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
H2afb3S4R1G7 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
H2afb3S4R1G7 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
H2afb3S4R1G7 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
H2afb3S4R1G7 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
H2afb3S4R1G7 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
H2afb3S4R1G7 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
H2afb3S4R1G7 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
H2afb3S4R1G7 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
H2afb3S4R1G7 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
H2afb3S4R1G7 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
H2afb3S4R1G7 Gm20482-202ENSMUST00000174729 825 ntBASIC10.37□□□□□ -0.75
H2afb3S4R1G7 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC10.37□□□□□ -0.75
H2afb3S4R1G7 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
H2afb3S4R1G7 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
H2afb3S4R1G7 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC10.37□□□□□ -0.75
H2afb3S4R1G7 Gm43184-201ENSMUST00000197247 542 ntBASIC10.37□□□□□ -0.75
H2afb3S4R1G7 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC10.37□□□□□ -0.75
H2afb3S4R1G7 Gm3961-201ENSMUST00000204425 994 ntBASIC10.37□□□□□ -0.75
H2afb3S4R1G7 Gm17827-201ENSMUST00000211825 742 ntBASIC10.37□□□□□ -0.75
H2afb3S4R1G7 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC10.37□□□□□ -0.75
H2afb3S4R1G7 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
H2afb3S4R1G7 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
H2afb3S4R1G7 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
H2afb3S4R1G7 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
H2afb3S4R1G7 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
H2afb3S4R1G7 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
H2afb3S4R1G7 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
H2afb3S4R1G7 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
H2afb3S4R1G7 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC10.37□□□□□ -0.75
H2afb3S4R1G7 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
H2afb3S4R1G7 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
H2afb3S4R1G7 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC10.37□□□□□ -0.75
H2afb3S4R1G7 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
H2afb3S4R1G7 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.37□□□□□ -0.75
H2afb3S4R1G7 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
H2afb3S4R1G7 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
H2afb3S4R1G7 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
H2afb3S4R1G7 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
H2afb3S4R1G7 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
H2afb3S4R1G7 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.37□□□□□ -0.75
H2afb3S4R1G7 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
H2afb3S4R1G7 Gm38292-201ENSMUST00000192646 3045 ntBASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Gm10782-202ENSMUST00000223775 1480 ntBASIC10.36□□□□□ -0.75
H2afb3S4R1G7 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms