Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Cd247-206ENSMUST00000161971 2713 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Smco4Q9JIS3 Traip-201ENSMUST00000049348 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smco4Q9JIS3 Gm29125-201ENSMUST00000187121 3220 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Smco4Q9JIS3 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Smco4Q9JIS3 Adam22-202ENSMUST00000050166 8969 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Smco4Q9JIS3 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smco4Q9JIS3 Gm21817-201ENSMUST00000178584 2583 ntBASIC9.16□□□□□ -0.94
Smco4Q9JIS3 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smco4Q9JIS3 Sh3rf2-201ENSMUST00000072008 5092 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smco4Q9JIS3 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smco4Q9JIS3 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smco4Q9JIS3 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC9.15□□□□□ -0.94
Smco4Q9JIS3 AC140462.2-201ENSMUST00000225718 2433 ntBASIC9.15□□□□□ -0.94
Smco4Q9JIS3 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smco4Q9JIS3 Slc24a1-201ENSMUST00000037798 5213 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smco4Q9JIS3 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smco4Q9JIS3 Gm43633-201ENSMUST00000202455 2330 ntBASIC9.15□□□□□ -0.94
Smco4Q9JIS3 Gm17980-201ENSMUST00000217977 2349 ntBASIC9.15□□□□□ -0.94
Smco4Q9JIS3 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smco4Q9JIS3 Ldlr-201ENSMUST00000034713 4627 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smco4Q9JIS3 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Smco4Q9JIS3 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Smco4Q9JIS3 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Smco4Q9JIS3 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smco4Q9JIS3 Epb41l4a-201ENSMUST00000025234 3853 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smco4Q9JIS3 Gm24830-201ENSMUST00000102024 166 ntBASIC9.15□□□□□ -0.94
Smco4Q9JIS3 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC9.15□□□□□ -0.94
Smco4Q9JIS3 Mir1896-201ENSMUST00000122641 81 ntBASIC9.15□□□□□ -0.94
Smco4Q9JIS3 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Smco4Q9JIS3 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Smco4Q9JIS3 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smco4Q9JIS3 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
Smco4Q9JIS3 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Smco4Q9JIS3 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC9.15□□□□□ -0.94
Smco4Q9JIS3 Gm32111-201ENSMUST00000207689 846 ntBASIC9.15□□□□□ -0.94
Smco4Q9JIS3 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC9.15□□□□□ -0.94
Smco4Q9JIS3 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Smco4Q9JIS3 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC9.15□□□□□ -0.94
Smco4Q9JIS3 Gm6888-201ENSMUST00000221983 706 ntBASIC9.15□□□□□ -0.94
Smco4Q9JIS3 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smco4Q9JIS3 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
Smco4Q9JIS3 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smco4Q9JIS3 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smco4Q9JIS3 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smco4Q9JIS3 Gm26232-201ENSMUST00000083360 166 ntBASIC9.15□□□□□ -0.94
Smco4Q9JIS3 Rnu1b6-201ENSMUST00000083839 166 ntBASIC9.15□□□□□ -0.94
Smco4Q9JIS3 Amph-201ENSMUST00000003345 3367 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smco4Q9JIS3 Arhgap17-202ENSMUST00000106442 3336 ntAPPRIS P4 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smco4Q9JIS3 Cass4-201ENSMUST00000099061 3731 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Smco4Q9JIS3 Upp2-201ENSMUST00000059102 2498 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Smco4Q9JIS3 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smco4Q9JIS3 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC9.15□□□□□ -0.94
Smco4Q9JIS3 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smco4Q9JIS3 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Smco4Q9JIS3 1810041L15Rik-201ENSMUST00000080751 5917 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Smco4Q9JIS3 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
Smco4Q9JIS3 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Smco4Q9JIS3 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Smco4Q9JIS3 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Smco4Q9JIS3 Cacna1c-222ENSMUST00000190285 6585 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Smco4Q9JIS3 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Smco4Q9JIS3 Sptan1-205ENSMUST00000113719 8018 ntTSL 5 BASIC9.15□□□□□ -0.95
Smco4Q9JIS3 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Smco4Q9JIS3 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Smco4Q9JIS3 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Smco4Q9JIS3 Smarca1-202ENSMUST00000088973 4798 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
Smco4Q9JIS3 Lrrc61-202ENSMUST00000114545 2913 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Smco4Q9JIS3 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
Smco4Q9JIS3 Zfp512-201ENSMUST00000076264 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Olfr569-202ENSMUST00000217024 4741 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Kif13b-203ENSMUST00000224503 8865 ntAPPRIS ALT2 BASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Slc16a5-202ENSMUST00000106532 2062 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Ncoa1-209ENSMUST00000220434 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Fancb-202ENSMUST00000101082 2980 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Enah-211ENSMUST00000193703 11229 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Gm30132-201ENSMUST00000212816 8757 ntTSL 5 BASIC9.14□□□□□ -0.95
Smco4Q9JIS3 AC174797.1-201ENSMUST00000224339 1649 ntBASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Klhl7-202ENSMUST00000163409 2857 ntTSL 2 BASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Gm5637-201ENSMUST00000153890 1119 ntBASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Gm23119-201ENSMUST00000158610 140 ntBASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Gm44064-201ENSMUST00000204964 1087 ntBASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Gm7183-201ENSMUST00000213870 1005 ntBASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Gm7293-201ENSMUST00000216682 1007 ntBASIC9.14□□□□□ -0.95
Smco4Q9JIS3 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 101.9 ms