Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC9.65□□□□□ -0.86
Ssbp3Q9D032 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Ssbp3Q9D032 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Ssbp3Q9D032 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Ssbp3Q9D032 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC9.65□□□□□ -0.87
Ssbp3Q9D032 Gm19692-201ENSMUST00000203856 2084 ntBASIC9.65□□□□□ -0.87
Ssbp3Q9D032 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Ssbp3Q9D032 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Ssbp3Q9D032 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Ssbp3Q9D032 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Ssbp3Q9D032 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC9.65□□□□□ -0.87
Ssbp3Q9D032 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Ssbp3Q9D032 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.87
Ssbp3Q9D032 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Ssbp3Q9D032 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Ssbp3Q9D032 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Gm5380-201ENSMUST00000119296 2136 ntBASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Gm14193-201ENSMUST00000105067 153 ntBASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Gm4726-201ENSMUST00000135604 736 ntBASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Gm6019-201ENSMUST00000148369 736 ntBASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Gm15881-201ENSMUST00000148792 942 ntBASIC9.64□□□□□ -0.87
Ssbp3Q9D032 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Gm9540-201ENSMUST00000188230 478 ntBASIC9.64□□□□□ -0.87
Ssbp3Q9D032 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Gm17831-201ENSMUST00000205579 900 ntBASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 AC112945.1-201ENSMUST00000226413 514 ntBASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Gm45251-201ENSMUST00000209486 1465 ntBASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Dopey2-207ENSMUST00000227156 7340 ntBASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Gm1840-201ENSMUST00000051687 1432 ntBASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Ssbp3Q9D032 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ssbp3Q9D032 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ssbp3Q9D032 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Ssbp3Q9D032 Gm18198-201ENSMUST00000204986 1551 ntBASIC9.63□□□□□ -0.87
Ssbp3Q9D032 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ssbp3Q9D032 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ssbp3Q9D032 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ssbp3Q9D032 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ssbp3Q9D032 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ssbp3Q9D032 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ssbp3Q9D032 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Ssbp3Q9D032 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ssbp3Q9D032 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ssbp3Q9D032 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ssbp3Q9D032 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Ssbp3Q9D032 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ssbp3Q9D032 Gm22920-201ENSMUST00000102175 109 ntBASIC9.63□□□□□ -0.87
Ssbp3Q9D032 Gm14314-201ENSMUST00000118225 1015 ntBASIC9.63□□□□□ -0.87
Ssbp3Q9D032 Gm15352-201ENSMUST00000118696 270 ntBASIC9.63□□□□□ -0.87
Ssbp3Q9D032 Gm11956-201ENSMUST00000119525 512 ntBASIC9.63□□□□□ -0.87
Ssbp3Q9D032 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC9.63□□□□□ -0.87
Ssbp3Q9D032 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ssbp3Q9D032 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ssbp3Q9D032 Gm3150-201ENSMUST00000166418 204 ntBASIC9.63□□□□□ -0.87
Ssbp3Q9D032 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC9.63□□□□□ -0.87
Ssbp3Q9D032 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC9.63□□□□□ -0.87
Ssbp3Q9D032 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms