Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Snf8Q9CZ28 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Snf8Q9CZ28 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Snf8Q9CZ28 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Snf8Q9CZ28 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Snf8Q9CZ28 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Snf8Q9CZ28 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Snf8Q9CZ28 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Snf8Q9CZ28 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Snf8Q9CZ28 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Snf8Q9CZ28 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Snf8Q9CZ28 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Snf8Q9CZ28 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Snf8Q9CZ28 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Snf8Q9CZ28 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snf8Q9CZ28 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snf8Q9CZ28 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snf8Q9CZ28 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Snf8Q9CZ28 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snf8Q9CZ28 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snf8Q9CZ28 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snf8Q9CZ28 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snf8Q9CZ28 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Snf8Q9CZ28 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snf8Q9CZ28 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snf8Q9CZ28 Gm14071-201ENSMUST00000117817 509 ntBASIC11.85□□□□□ -0.51
Snf8Q9CZ28 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.85□□□□□ -0.51
Snf8Q9CZ28 Gm14726-201ENSMUST00000120623 896 ntBASIC11.85□□□□□ -0.51
Snf8Q9CZ28 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Snf8Q9CZ28 Gm2991-201ENSMUST00000173338 480 ntBASIC11.85□□□□□ -0.51
Snf8Q9CZ28 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snf8Q9CZ28 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.85□□□□□ -0.51
Snf8Q9CZ28 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.85□□□□□ -0.51
Snf8Q9CZ28 Gm32999-201ENSMUST00000192693 562 ntBASIC11.85□□□□□ -0.51
Snf8Q9CZ28 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.85□□□□□ -0.51
Snf8Q9CZ28 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.85□□□□□ -0.51
Snf8Q9CZ28 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.85□□□□□ -0.51
Snf8Q9CZ28 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snf8Q9CZ28 Gm6334-201ENSMUST00000207083 228 ntBASIC11.85□□□□□ -0.51
Snf8Q9CZ28 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Snf8Q9CZ28 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.85□□□□□ -0.51
Snf8Q9CZ28 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.85□□□□□ -0.51
Snf8Q9CZ28 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snf8Q9CZ28 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snf8Q9CZ28 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snf8Q9CZ28 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Snf8Q9CZ28 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Snf8Q9CZ28 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Snf8Q9CZ28 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snf8Q9CZ28 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snf8Q9CZ28 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Snf8Q9CZ28 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snf8Q9CZ28 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Snf8Q9CZ28 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snf8Q9CZ28 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snf8Q9CZ28 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snf8Q9CZ28 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snf8Q9CZ28 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Gm8885-201ENSMUST00000189382 598 ntBASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Gm38117-201ENSMUST00000194653 939 ntBASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Rprl1-202ENSMUST00000198476 238 ntBASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms