Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC10.91□□□□□ -0.66
Ska1Q9CPV1 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ska1Q9CPV1 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ska1Q9CPV1 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ska1Q9CPV1 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Ska1Q9CPV1 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ska1Q9CPV1 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Ska1Q9CPV1 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ska1Q9CPV1 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10.91□□□□□ -0.66
Ska1Q9CPV1 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ska1Q9CPV1 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC10.91□□□□□ -0.66
Ska1Q9CPV1 Gm11930-201ENSMUST00000117788 190 ntBASIC10.91□□□□□ -0.66
Ska1Q9CPV1 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC10.91□□□□□ -0.66
Ska1Q9CPV1 Gm11960-201ENSMUST00000122068 925 ntBASIC10.91□□□□□ -0.66
Ska1Q9CPV1 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.91□□□□□ -0.66
Ska1Q9CPV1 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC10.91□□□□□ -0.66
Ska1Q9CPV1 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Ska1Q9CPV1 Gm2991-201ENSMUST00000173338 480 ntBASIC10.91□□□□□ -0.66
Ska1Q9CPV1 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ska1Q9CPV1 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.91□□□□□ -0.66
Ska1Q9CPV1 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC10.91□□□□□ -0.66
Ska1Q9CPV1 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC10.91□□□□□ -0.66
Ska1Q9CPV1 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC10.91□□□□□ -0.66
Ska1Q9CPV1 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC10.91□□□□□ -0.66
Ska1Q9CPV1 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC10.91□□□□□ -0.66
Ska1Q9CPV1 Lect2-202ENSMUST00000225183 823 ntBASIC10.91□□□□□ -0.66
Ska1Q9CPV1 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ska1Q9CPV1 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ska1Q9CPV1 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ska1Q9CPV1 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ska1Q9CPV1 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ska1Q9CPV1 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ska1Q9CPV1 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ska1Q9CPV1 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ska1Q9CPV1 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Ska1Q9CPV1 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ska1Q9CPV1 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Ska1Q9CPV1 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ska1Q9CPV1 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Ska1Q9CPV1 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
Ska1Q9CPV1 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ska1Q9CPV1 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Ska1Q9CPV1 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC10.9□□□□□ -0.66
Ska1Q9CPV1 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ska1Q9CPV1 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ska1Q9CPV1 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ska1Q9CPV1 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ska1Q9CPV1 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Ska1Q9CPV1 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ska1Q9CPV1 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ska1Q9CPV1 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ska1Q9CPV1 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ska1Q9CPV1 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ska1Q9CPV1 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ska1Q9CPV1 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ska1Q9CPV1 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ska1Q9CPV1 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ska1Q9CPV1 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.9□□□□□ -0.66
Ska1Q9CPV1 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ska1Q9CPV1 Gm13326-201ENSMUST00000118730 1011 ntBASIC10.9□□□□□ -0.66
Ska1Q9CPV1 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ska1Q9CPV1 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ska1Q9CPV1 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.9□□□□□ -0.66
Ska1Q9CPV1 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ska1Q9CPV1 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.9□□□□□ -0.66
Ska1Q9CPV1 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Ska1Q9CPV1 Gm27046-201ENSMUST00000182160 463 ntBASIC10.9□□□□□ -0.66
Ska1Q9CPV1 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC10.9□□□□□ -0.66
Ska1Q9CPV1 Gm6621-201ENSMUST00000193251 772 ntBASIC10.9□□□□□ -0.66
Ska1Q9CPV1 Gm38266-201ENSMUST00000194931 421 ntBASIC10.9□□□□□ -0.66
Ska1Q9CPV1 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC10.9□□□□□ -0.66
Ska1Q9CPV1 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ska1Q9CPV1 Gm5186-201ENSMUST00000218781 920 ntBASIC10.9□□□□□ -0.66
Ska1Q9CPV1 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Ska1Q9CPV1 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC10.9□□□□□ -0.66
Ska1Q9CPV1 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ska1Q9CPV1 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ska1Q9CPV1 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ska1Q9CPV1 Gm10652-201ENSMUST00000199790 2622 ntBASIC10.9□□□□□ -0.66
Ska1Q9CPV1 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.9□□□□□ -0.66
Ska1Q9CPV1 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ska1Q9CPV1 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC10.9□□□□□ -0.66
Ska1Q9CPV1 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ska1Q9CPV1 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ska1Q9CPV1 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Ska1Q9CPV1 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Ska1Q9CPV1 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Ska1Q9CPV1 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Ska1Q9CPV1 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.67
Ska1Q9CPV1 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Ska1Q9CPV1 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Ska1Q9CPV1 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Ska1Q9CPV1 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ska1Q9CPV1 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ska1Q9CPV1 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms