Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Gm43937-201ENSMUST00000204640 3122 ntBASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Gm37954-201ENSMUST00000195400 2071 ntBASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Krt88Q9CPR6 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Krt88Q9CPR6 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Krt88Q9CPR6 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Krt88Q9CPR6 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Krt88Q9CPR6 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Krt88Q9CPR6 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Krt88Q9CPR6 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC10.37□□□□□ -0.75
Krt88Q9CPR6 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Krt88Q9CPR6 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Krt88Q9CPR6 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Krt88Q9CPR6 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Krt88Q9CPR6 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Krt88Q9CPR6 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC10.37□□□□□ -0.75
Krt88Q9CPR6 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.37□□□□□ -0.75
Krt88Q9CPR6 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Krt88Q9CPR6 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Krt88Q9CPR6 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Krt88Q9CPR6 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Krt88Q9CPR6 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Krt88Q9CPR6 Gm6023-201ENSMUST00000118217 606 ntBASIC10.37□□□□□ -0.75
Krt88Q9CPR6 Trav4d-2-201ENSMUST00000120914 335 ntBASIC10.37□□□□□ -0.75
Krt88Q9CPR6 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Krt88Q9CPR6 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Krt88Q9CPR6 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC10.37□□□□□ -0.75
Krt88Q9CPR6 Gm8062-201ENSMUST00000139696 444 ntBASIC10.37□□□□□ -0.75
Krt88Q9CPR6 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Krt88Q9CPR6 Gm8565-201ENSMUST00000183259 1014 ntBASIC10.37□□□□□ -0.75
Krt88Q9CPR6 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Krt88Q9CPR6 Gm9230-201ENSMUST00000188228 532 ntBASIC10.37□□□□□ -0.75
Krt88Q9CPR6 Gm43630-201ENSMUST00000201550 776 ntBASIC10.37□□□□□ -0.75
Krt88Q9CPR6 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC10.37□□□□□ -0.75
Krt88Q9CPR6 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Krt88Q9CPR6 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.37□□□□□ -0.75
Krt88Q9CPR6 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.37□□□□□ -0.75
Krt88Q9CPR6 AC154462.2-201ENSMUST00000227519 370 ntBASIC10.37□□□□□ -0.75
Krt88Q9CPR6 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC10.37□□□□□ -0.75
Krt88Q9CPR6 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Krt88Q9CPR6 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Krt88Q9CPR6 Gm9899-201ENSMUST00000065519 555 ntBASIC10.37□□□□□ -0.75
Krt88Q9CPR6 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Krt88Q9CPR6 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Krt88Q9CPR6 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Krt88Q9CPR6 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Krt88Q9CPR6 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Krt88Q9CPR6 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Krt88Q9CPR6 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Krt88Q9CPR6 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC10.37□□□□□ -0.75
Krt88Q9CPR6 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Adgrv1-214ENSMUST00000224088 1492 ntBASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Krt88Q9CPR6 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms