Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Prpf8Q99PV0 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Prpf8Q99PV0 Gm22442-201ENSMUST00000157256 144 ntBASIC9.47□□□□□ -0.89
Prpf8Q99PV0 Gm24248-201ENSMUST00000157321 322 ntBASIC9.47□□□□□ -0.89
Prpf8Q99PV0 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Prpf8Q99PV0 Gm18201-201ENSMUST00000174735 875 ntBASIC9.47□□□□□ -0.89
Prpf8Q99PV0 Gm19587-201ENSMUST00000191395 545 ntBASIC9.47□□□□□ -0.89
Prpf8Q99PV0 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC9.47□□□□□ -0.89
Prpf8Q99PV0 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Prpf8Q99PV0 AC154572.1-201ENSMUST00000226098 1204 ntBASIC9.47□□□□□ -0.89
Prpf8Q99PV0 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Prpf8Q99PV0 Gm23105-201ENSMUST00000083719 134 ntBASIC9.47□□□□□ -0.89
Prpf8Q99PV0 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Prpf8Q99PV0 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Prpf8Q99PV0 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Prpf8Q99PV0 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Prpf8Q99PV0 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Prpf8Q99PV0 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Prpf8Q99PV0 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC9.47□□□□□ -0.89
Prpf8Q99PV0 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Prpf8Q99PV0 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Prpf8Q99PV0 AC164702.1-201ENSMUST00000220135 2212 ntBASIC9.47□□□□□ -0.89
Prpf8Q99PV0 Gm45546-201ENSMUST00000211053 2394 ntBASIC9.47□□□□□ -0.89
Prpf8Q99PV0 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Prpf8Q99PV0 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Prpf8Q99PV0 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Prpf8Q99PV0 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC9.47□□□□□ -0.89
Prpf8Q99PV0 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC9.47□□□□□ -0.89
Prpf8Q99PV0 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Prpf8Q99PV0 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Prpf8Q99PV0 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Prpf8Q99PV0 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Prpf8Q99PV0 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Prpf8Q99PV0 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Prpf8Q99PV0 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Prpf8Q99PV0 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Prpf8Q99PV0 Gm12783-201ENSMUST00000121425 397 ntBASIC9.47□□□□□ -0.89
Prpf8Q99PV0 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC9.47□□□□□ -0.89
Prpf8Q99PV0 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC9.47□□□□□ -0.89
Prpf8Q99PV0 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC9.47□□□□□ -0.89
Prpf8Q99PV0 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Prpf8Q99PV0 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Prpf8Q99PV0 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Prpf8Q99PV0 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC9.47□□□□□ -0.89
Prpf8Q99PV0 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC9.47□□□□□ -0.89
Prpf8Q99PV0 Gm5340-201ENSMUST00000203733 880 ntBASIC9.47□□□□□ -0.89
Prpf8Q99PV0 Gm8342-201ENSMUST00000209839 757 ntBASIC9.47□□□□□ -0.89
Prpf8Q99PV0 Gm39288-201ENSMUST00000210554 446 ntBASIC9.47□□□□□ -0.89
Prpf8Q99PV0 AC098716.1-201ENSMUST00000213527 703 ntBASIC9.47□□□□□ -0.89
Prpf8Q99PV0 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Prpf8Q99PV0 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Prpf8Q99PV0 Gm16380-201ENSMUST00000077997 478 ntBASIC9.47□□□□□ -0.89
Prpf8Q99PV0 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC9.47□□□□□ -0.89
Prpf8Q99PV0 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Prpf8Q99PV0 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Prpf8Q99PV0 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
Prpf8Q99PV0 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC9.46□□□□□ -0.89
Prpf8Q99PV0 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Prpf8Q99PV0 Parva-201ENSMUST00000033030 4454 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Prpf8Q99PV0 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Prpf8Q99PV0 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC9.46□□□□□ -0.89
Prpf8Q99PV0 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Prpf8Q99PV0 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Prpf8Q99PV0 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Prpf8Q99PV0 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Prpf8Q99PV0 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC9.46□□□□□ -0.89
Prpf8Q99PV0 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Prpf8Q99PV0 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Prpf8Q99PV0 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC9.46□□□□□ -0.89
Prpf8Q99PV0 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Prpf8Q99PV0 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Prpf8Q99PV0 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Prpf8Q99PV0 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Prpf8Q99PV0 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Prpf8Q99PV0 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Prpf8Q99PV0 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Prpf8Q99PV0 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC9.46□□□□□ -0.9
Prpf8Q99PV0 Gm12218-201ENSMUST00000117666 399 ntBASIC9.46□□□□□ -0.9
Prpf8Q99PV0 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC9.46□□□□□ -0.9
Prpf8Q99PV0 Gm24398-201ENSMUST00000157870 109 ntBASIC9.46□□□□□ -0.9
Prpf8Q99PV0 Gm25604-201ENSMUST00000158359 133 ntBASIC9.46□□□□□ -0.9
Prpf8Q99PV0 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Prpf8Q99PV0 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Prpf8Q99PV0 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Prpf8Q99PV0 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC9.46□□□□□ -0.9
Prpf8Q99PV0 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC9.46□□□□□ -0.9
Prpf8Q99PV0 Gm42433-201ENSMUST00000196806 940 ntBASIC9.46□□□□□ -0.9
Prpf8Q99PV0 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Prpf8Q99PV0 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC9.46□□□□□ -0.9
Prpf8Q99PV0 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC9.46□□□□□ -0.9
Prpf8Q99PV0 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.9
Prpf8Q99PV0 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Prpf8Q99PV0 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Prpf8Q99PV0 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Prpf8Q99PV0 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Prpf8Q99PV0 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Prpf8Q99PV0 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Prpf8Q99PV0 Ntrk2-208ENSMUST00000225583 2719 ntBASIC9.46□□□□□ -0.9
Prpf8Q99PV0 Gm27196-201ENSMUST00000184787 2582 ntBASIC9.46□□□□□ -0.9
Prpf8Q99PV0 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms