Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC11.31□□□□□ -0.6
Trim8Q99PJ2 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Trim8Q99PJ2 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim8Q99PJ2 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim8Q99PJ2 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim8Q99PJ2 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim8Q99PJ2 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim8Q99PJ2 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim8Q99PJ2 AC125409.1-201ENSMUST00000223213 3370 ntBASIC11.31□□□□□ -0.6
Trim8Q99PJ2 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim8Q99PJ2 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.31□□□□□ -0.6
Trim8Q99PJ2 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim8Q99PJ2 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim8Q99PJ2 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim8Q99PJ2 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim8Q99PJ2 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.3□□□□□ -0.6
Trim8Q99PJ2 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.3□□□□□ -0.6
Trim8Q99PJ2 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim8Q99PJ2 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim8Q99PJ2 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim8Q99PJ2 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim8Q99PJ2 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim8Q99PJ2 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim8Q99PJ2 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim8Q99PJ2 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim8Q99PJ2 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim8Q99PJ2 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim8Q99PJ2 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim8Q99PJ2 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim8Q99PJ2 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.3□□□□□ -0.6
Trim8Q99PJ2 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.3□□□□□ -0.6
Trim8Q99PJ2 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim8Q99PJ2 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.3□□□□□ -0.6
Trim8Q99PJ2 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim8Q99PJ2 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim8Q99PJ2 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.3□□□□□ -0.6
Trim8Q99PJ2 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.3□□□□□ -0.6
Trim8Q99PJ2 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trim8Q99PJ2 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.3□□□□□ -0.6
Trim8Q99PJ2 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trim8Q99PJ2 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.3□□□□□ -0.6
Trim8Q99PJ2 Gm26956-201ENSMUST00000182176 986 ntBASIC11.3□□□□□ -0.6
Trim8Q99PJ2 Gm6621-201ENSMUST00000193251 772 ntBASIC11.3□□□□□ -0.6
Trim8Q99PJ2 Gm38341-201ENSMUST00000195357 515 ntBASIC11.3□□□□□ -0.6
Trim8Q99PJ2 Gm43758-201ENSMUST00000199500 367 ntBASIC11.3□□□□□ -0.6
Trim8Q99PJ2 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim8Q99PJ2 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.3□□□□□ -0.6
Trim8Q99PJ2 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.3□□□□□ -0.6
Trim8Q99PJ2 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC11.3□□□□□ -0.6
Trim8Q99PJ2 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC11.3□□□□□ -0.6
Trim8Q99PJ2 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.3□□□□□ -0.6
Trim8Q99PJ2 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim8Q99PJ2 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trim8Q99PJ2 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim8Q99PJ2 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trim8Q99PJ2 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim8Q99PJ2 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.3□□□□□ -0.6
Trim8Q99PJ2 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trim8Q99PJ2 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim8Q99PJ2 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trim8Q99PJ2 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim8Q99PJ2 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim8Q99PJ2 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC11.3□□□□□ -0.6
Trim8Q99PJ2 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim8Q99PJ2 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim8Q99PJ2 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim8Q99PJ2 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim8Q99PJ2 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim8Q99PJ2 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim8Q99PJ2 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim8Q99PJ2 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim8Q99PJ2 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trim8Q99PJ2 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.29□□□□□ -0.6
Trim8Q99PJ2 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trim8Q99PJ2 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim8Q99PJ2 Gm12015-201ENSMUST00000117065 843 ntBASIC11.29□□□□□ -0.6
Trim8Q99PJ2 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trim8Q99PJ2 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.29□□□□□ -0.6
Trim8Q99PJ2 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim8Q99PJ2 Gm19287-201ENSMUST00000203190 358 ntBASIC11.29□□□□□ -0.6
Trim8Q99PJ2 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim8Q99PJ2 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.29□□□□□ -0.6
Trim8Q99PJ2 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.29□□□□□ -0.6
Trim8Q99PJ2 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.29□□□□□ -0.6
Trim8Q99PJ2 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim8Q99PJ2 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim8Q99PJ2 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim8Q99PJ2 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim8Q99PJ2 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim8Q99PJ2 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim8Q99PJ2 Bcl2-202ENSMUST00000189999 2841 ntBASIC11.29□□□□□ -0.6
Trim8Q99PJ2 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim8Q99PJ2 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim8Q99PJ2 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim8Q99PJ2 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim8Q99PJ2 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim8Q99PJ2 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms