Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 CT573086.2-201ENSMUST00000227277 4992 ntBASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Gm12663-201ENSMUST00000118481 958 ntBASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Gm6630-201ENSMUST00000119199 454 ntBASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Gm11502-201ENSMUST00000120917 1211 ntBASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Gm16030-201ENSMUST00000159098 603 ntBASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Gm9630-201ENSMUST00000178304 885 ntBASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Gm44216-201ENSMUST00000203942 157 ntBASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Gm5996-201ENSMUST00000211110 718 ntBASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 AC158388.3-202ENSMUST00000225517 775 ntBASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Gm23400-201ENSMUST00000174994 102 ntBASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Gm26463-201ENSMUST00000175065 101 ntBASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Gm24332-201ENSMUST00000175102 102 ntBASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Gm25959-201ENSMUST00000175112 102 ntBASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Gm22475-201ENSMUST00000175169 102 ntBASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Gm22903-201ENSMUST00000175193 102 ntBASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Gm25070-201ENSMUST00000175237 102 ntBASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Gm24159-201ENSMUST00000175264 102 ntBASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Gm25299-201ENSMUST00000175283 102 ntBASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Gm25998-201ENSMUST00000175397 53 ntBASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Gm23798-201ENSMUST00000175560 102 ntBASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Gm23802-201ENSMUST00000175565 102 ntBASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Gm25708-201ENSMUST00000177687 102 ntBASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Gm24370-201ENSMUST00000178007 102 ntBASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Gm23049-201ENSMUST00000178068 102 ntBASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Gm28019-201ENSMUST00000178138 101 ntBASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Gm25571-201ENSMUST00000178322 102 ntBASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Gm25355-201ENSMUST00000178456 101 ntBASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Gm24975-201ENSMUST00000178492 101 ntBASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Gm23189-201ENSMUST00000178954 102 ntBASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Gm25100-201ENSMUST00000179750 101 ntBASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Gm23064-201ENSMUST00000179866 101 ntBASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 CT010506.1-201ENSMUST00000223673 349 ntBASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 AC164437.3-201ENSMUST00000228323 347 ntBASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 97.8 ms