Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cstf3Q99LI7 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Cstf3Q99LI7 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Cstf3Q99LI7 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.15□□□□□ -0.62
Cstf3Q99LI7 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cstf3Q99LI7 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cstf3Q99LI7 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cstf3Q99LI7 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cstf3Q99LI7 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cstf3Q99LI7 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cstf3Q99LI7 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cstf3Q99LI7 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cstf3Q99LI7 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Cstf3Q99LI7 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.15□□□□□ -0.63
Cstf3Q99LI7 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cstf3Q99LI7 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC11.15□□□□□ -0.63
Cstf3Q99LI7 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.15□□□□□ -0.63
Cstf3Q99LI7 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.15□□□□□ -0.63
Cstf3Q99LI7 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.14□□□□□ -0.63
Cstf3Q99LI7 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cstf3Q99LI7 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cstf3Q99LI7 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cstf3Q99LI7 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Cstf3Q99LI7 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cstf3Q99LI7 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cstf3Q99LI7 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cstf3Q99LI7 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.14□□□□□ -0.63
Cstf3Q99LI7 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Cstf3Q99LI7 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cstf3Q99LI7 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cstf3Q99LI7 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
Cstf3Q99LI7 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cstf3Q99LI7 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.14□□□□□ -0.63
Cstf3Q99LI7 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.14□□□□□ -0.63
Cstf3Q99LI7 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.14□□□□□ -0.63
Cstf3Q99LI7 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cstf3Q99LI7 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cstf3Q99LI7 Gm24749-201ENSMUST00000157838 343 ntBASIC11.14□□□□□ -0.63
Cstf3Q99LI7 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Cstf3Q99LI7 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cstf3Q99LI7 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.14□□□□□ -0.63
Cstf3Q99LI7 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cstf3Q99LI7 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Cstf3Q99LI7 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cstf3Q99LI7 Gm44262-201ENSMUST00000204969 372 ntBASIC11.14□□□□□ -0.63
Cstf3Q99LI7 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.14□□□□□ -0.63
Cstf3Q99LI7 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.14□□□□□ -0.63
Cstf3Q99LI7 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.14□□□□□ -0.63
Cstf3Q99LI7 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cstf3Q99LI7 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cstf3Q99LI7 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cstf3Q99LI7 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cstf3Q99LI7 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cstf3Q99LI7 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cstf3Q99LI7 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Cstf3Q99LI7 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cstf3Q99LI7 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cstf3Q99LI7 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cstf3Q99LI7 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Cstf3Q99LI7 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cstf3Q99LI7 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cstf3Q99LI7 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cstf3Q99LI7 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cstf3Q99LI7 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Cstf3Q99LI7 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Gm23949-201ENSMUST00000104027 127 ntBASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Gm23596-201ENSMUST00000104304 132 ntBASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Mir6420-201ENSMUST00000185032 102 ntBASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Gm28686-201ENSMUST00000187404 609 ntBASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Gm3332-201ENSMUST00000189337 928 ntBASIC11.13□□□□□ -0.63
Cstf3Q99LI7 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms