Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smc1bQ920F6 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smc1bQ920F6 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Smc1bQ920F6 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smc1bQ920F6 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smc1bQ920F6 Gm37859-201ENSMUST00000195529 2173 ntBASIC13.38□□□□□ -0.27
Smc1bQ920F6 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smc1bQ920F6 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smc1bQ920F6 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smc1bQ920F6 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smc1bQ920F6 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smc1bQ920F6 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smc1bQ920F6 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smc1bQ920F6 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smc1bQ920F6 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smc1bQ920F6 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smc1bQ920F6 AC122291.1-201ENSMUST00000228937 5748 ntBASIC13.37□□□□□ -0.27
Smc1bQ920F6 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smc1bQ920F6 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smc1bQ920F6 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smc1bQ920F6 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Smc1bQ920F6 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Smc1bQ920F6 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Smc1bQ920F6 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smc1bQ920F6 Gm13328-201ENSMUST00000120816 1020 ntBASIC13.37□□□□□ -0.27
Smc1bQ920F6 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC13.37□□□□□ -0.27
Smc1bQ920F6 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC13.37□□□□□ -0.27
Smc1bQ920F6 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC13.37□□□□□ -0.27
Smc1bQ920F6 Gm4862-201ENSMUST00000170405 438 ntBASIC13.37□□□□□ -0.27
Smc1bQ920F6 Mir6923-201ENSMUST00000184592 72 ntBASIC13.37□□□□□ -0.27
Smc1bQ920F6 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC13.37□□□□□ -0.27
Smc1bQ920F6 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC13.37□□□□□ -0.27
Smc1bQ920F6 Gm35713-201ENSMUST00000210516 199 ntBASIC13.37□□□□□ -0.27
Smc1bQ920F6 Gm9661-201ENSMUST00000221611 1122 ntBASIC13.37□□□□□ -0.27
Smc1bQ920F6 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Smc1bQ920F6 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smc1bQ920F6 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Smc1bQ920F6 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smc1bQ920F6 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smc1bQ920F6 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smc1bQ920F6 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smc1bQ920F6 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Smc1bQ920F6 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smc1bQ920F6 Gm7537-201ENSMUST00000221660 1414 ntBASIC13.37□□□□□ -0.27
Smc1bQ920F6 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smc1bQ920F6 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smc1bQ920F6 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smc1bQ920F6 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.37□□□□□ -0.27
Smc1bQ920F6 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smc1bQ920F6 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smc1bQ920F6 Gm37542-201ENSMUST00000192563 2832 ntBASIC13.36□□□□□ -0.27
Smc1bQ920F6 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smc1bQ920F6 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Smc1bQ920F6 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smc1bQ920F6 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC13.36□□□□□ -0.27
Smc1bQ920F6 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smc1bQ920F6 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smc1bQ920F6 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Smc1bQ920F6 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smc1bQ920F6 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Smc1bQ920F6 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Smc1bQ920F6 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Smc1bQ920F6 Gm8731-201ENSMUST00000118088 412 ntBASIC13.36□□□□□ -0.27
Smc1bQ920F6 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smc1bQ920F6 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smc1bQ920F6 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smc1bQ920F6 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC13.36□□□□□ -0.27
Smc1bQ920F6 Gm5100-201ENSMUST00000195631 589 ntBASIC13.36□□□□□ -0.27
Smc1bQ920F6 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC13.36□□□□□ -0.27
Smc1bQ920F6 Gm45594-201ENSMUST00000211717 241 ntBASIC13.36□□□□□ -0.27
Smc1bQ920F6 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC13.36□□□□□ -0.27
Smc1bQ920F6 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smc1bQ920F6 Gm19640-201ENSMUST00000214849 464 ntBASIC13.36□□□□□ -0.27
Smc1bQ920F6 Gm3619-201ENSMUST00000219947 775 ntBASIC13.36□□□□□ -0.27
Smc1bQ920F6 CT009536.2-201ENSMUST00000225370 665 ntBASIC13.36□□□□□ -0.27
Smc1bQ920F6 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Smc1bQ920F6 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smc1bQ920F6 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Smc1bQ920F6 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Smc1bQ920F6 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smc1bQ920F6 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smc1bQ920F6 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smc1bQ920F6 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smc1bQ920F6 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smc1bQ920F6 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smc1bQ920F6 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smc1bQ920F6 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smc1bQ920F6 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smc1bQ920F6 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smc1bQ920F6 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smc1bQ920F6 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smc1bQ920F6 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Smc1bQ920F6 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smc1bQ920F6 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smc1bQ920F6 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smc1bQ920F6 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC13.35□□□□□ -0.27
Smc1bQ920F6 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smc1bQ920F6 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC13.35□□□□□ -0.27
Smc1bQ920F6 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smc1bQ920F6 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms